Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03964 ATGGCGCAGGAGCGTCGATTCGTCGCTCTCTCCGACCCTCATCTCATCCTCCATCTCTCATTATCAATGCTTGGTGCCGGTTACACTGAAAGTGACGATGATGCTACCAAAGAAGATGATGATTTTGTCTTTGAGATAGATCCTACCGTCTTAGTGGATACTCGTAAACTTATAATTGATGAACCCATCGCAGAAGGGTCAAATGCAATTGTCTACAAAGGGTGGTATGAATTCAATCCTGTATCCATAAAGGTTTTGCTTCCAATGCAAACATCAAATGCTAGTTCTGCTTGTAAAGCAAAATTTCAGCGGGAGGTTAACTTGATATCCAGAATCAAACATAAAAATATAATAAAGTTTATTGGCGCCTCTGTCGAGCCAAGAATGATGATAATTACAGAACTTTTGGAAGGTTGTTCGCTTCCTAAATACCTAGAGAGCATTTATCCAAATGCTCTAAGTTTAGAGCAATCCATAAGTTTTGCTTTGGATATTTCTCAAGCTATGGAGTATTTGCATGCAAATGGCATTATTCACCGCGATTTAAAACCTGGTAATTTGCTTCTTCGCGACGACAAAATGCAAATTTTACTTACAAATTTCGAGACAGCTAGAGAGGAGATACCTGGTGAAATGACATCTGAGGCTGGTACATATCGATACATGGCTCCTGAGTTATTTAGCAAGGATCCACTTTCGAAAGGAGAAAAGAAATGCTATGACCATAGGGTAGACATTCATAGCTTTGCTATGGTTCTGTGGGCCATAATTAAAAATCAAACTCCATTTAAAGGAAGGTGTGACTTGTTAGCTGCATATGCTACTGCAAAAAACATGAGGCCTAGTTTGGAGGGTTTTCCAGAAGTTCTACTTCCATTAATGCAGTCTTGTTGGGAAGAAGACCCAAATCTACGACCTGAATTCTCAGAGATCACCCAAATTCTTGAAAAAATTCTCCATCACTCAACAGGTATATCACCTGAGATAGAGGAGTGTCCAATTACAAGCGTGCATGAACCTATCACTAATTATGTTGAAGACAAATCAGAACATGTAGATGAGGCTCAGAGTCTGAATACCATTGTCTGCATAGAGGGAGAATCTCAGATCATAACAGAACCCTTTAGCCAAGTCGCAGCCCAAACCAAGCCTAAAAAGACTCCTAAGAAATGCAAGGGTTTATTATTTTTTAGTAAATGCTTTCACTTTTGTTGA 1215 0.3942 MAQERRFVALSDPHLILHLSLSMLGAGYTESDDDATKEDDDFVFEIDPTVLVDTRKLIIDEPIAEGSNAIVYKGWYEFNPVSIKVLLPMQTSNASSACKAKFQREVNLISRIKHKNIIKFIGASVEPRMMIITELLEGCSLPKYLESIYPNALSLEQSISFALDISQAMEYLHANGIIHRDLKPGNLLLRDDKMQILLTNFETAREEIPGEMTSEAGTYRYMAPELFSKDPLSKGEKKCYDHRVDIHSFAMVLWAIIKNQTPFKGRCDLLAAYATAKNMRPSLEGFPEVLLPLMQSCWEEDPNLRPEFSEITQILEKILHHSTGISPEIEECPITSVHEPITNYVEDKSEHVDEAQSLNTIVCIEGESQIITEPFSQVAAQTKPKKTPKKCKGLLFFSKCFHFC* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03964 404 SMART serkin_6 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03964 404 Pfam Protein tyrosine and serine/threonine kinase 59 315 IPR001245 GO:0004672|GO:0006468
Phac3g03964 404 ProSiteProfiles Protein kinase domain profile. 57 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03964 404 SUPERFAMILY Protein kinase-like (PK-like) 50 346 IPR011009 -
Phac3g03964 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 177 189 IPR008271 GO:0004672|GO:0006468
Phac3g03964 404 Gene3D Phosphorylase Kinase; domain 1 47 137 - -
Phac3g03964 404 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 57 321 - -
Phac3g03964 404 PRINTS Tyrosine kinase catalytic domain signature 133 146 IPR001245 GO:0004672|GO:0006468
Phac3g03964 404 PRINTS Tyrosine kinase catalytic domain signature 286 308 IPR001245 GO:0004672|GO:0006468
Phac3g03964 404 PRINTS Tyrosine kinase catalytic domain signature 171 189 IPR001245 GO:0004672|GO:0006468
Phac3g03964 404 Gene3D Transferase(Phosphotransferase) domain 1 138 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03964 Phac-Chr3 39284274 39292730 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03964 39 320 MAP Kinase Kinase Kinase AT5G66710 53.004 3.05e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phac3g03964 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03964 - K04427 pvu:PHAVU_003G251900g 743.421