Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03963 ATGAATCATGGAGCTGTTGAAGGCCATACGAGGCTCTTCTCTCACCAATATCCTGCTGCATTCACTCAACCAACTCCTCCTCAACAAGCCAAGCCAAGACGCAAGAGAAACAAAAATGGAGTTATGGGCTCCACCAAGAAGAGAAAGCTCAGTGCCGAGCAAGTTAGTCTTCTTGAGAAAAATTTCTGCATTCAACATAAACTTCAATCTGAAAGGAAGGACCAACTCGCATTTGAGCTTGGTATGGACCCTCGACAAGTTGCGGTATGGTTTCAAAATCGACGTTTTCGTTGGAAGACTAAAAAGTTGGAGGAAGAGTACTCCAATCTTAAGAATCTTCATGAAACCACCCTTCTCCAGAAATGCCACCTTCAGACTCGGGTGTTGAATCTGGAGGAGCAGCTTTTGGAAGCAAAGAAGGAGATTCAGCAGCTACAAGAGCGTGGTGAAAGAGCTCCAACCAAACACTTACTGGAAGCTGTGAACCCACCATTTCTTGGAGAGTTTAGGGTGGAAGACTATGATTATGCTGATGTCTTTTACATTCCGGAGACTCATTACATCAGTGGAATGGAGTGGATTAATTTCTAA 591 0.4399 MNHGAVEGHTRLFSHQYPAAFTQPTPPQQAKPRRKRNKNGVMGSTKKRKLSAEQVSLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRVLNLEEQLLEAKKEIQQLQERGERAPTKHLLEAVNPPFLGEFRVEDYDYADVFYIPETHYISGMEWINF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03963 196 ProSiteProfiles 'Homeobox' domain profile. 41 101 IPR001356 GO:0003677
Phac3g03963 196 Coils Coil 93 113 - -
Phac3g03963 196 CDD homeodomain 46 102 IPR001356 GO:0003677
Phac3g03963 196 Gene3D - 37 109 - -
Phac3g03963 196 SUPERFAMILY Homeodomain-like 45 109 IPR009057 -
Phac3g03963 196 Pfam Homeodomain 46 99 IPR001356 GO:0003677
Phac3g03963 196 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 35 147 IPR045224 GO:0003700
Phac3g03963 196 SMART HOX_1 44 105 IPR001356 GO:0003677
Phac3g03963 196 MobiDBLite consensus disorder prediction 1 48 - -
Phac3g03963 196 Coils Coil 128 148 - -
Phac3g03963 196 MobiDBLite consensus disorder prediction 16 30 - -
Phac3g03963 196 ProSitePatterns 'Homeobox' domain signature. 76 99 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03963 Phac-Chr3 39273756 39275008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03963 1 196 Homeobox Transcription Factor Family AT4G36740 45.581 4.52e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac3g03963 Homeodomain 6.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03963 K09338 - gmx:100803948 254.218