Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03962 ATGGGCTCCACCAAGAAGAGAAAGCTCAGTGCCGAGCAAGTTAGTCTTCTTGAGAAAAATTTCTGCATTCAACATAAACTTCAATCTGAAAGGAAGGACCAACTCGCATTTGAGCTTGGTATGGACCCTCGACAAGTTGCGGTATGGTTTCAAAATCGACGTTTTCGTTGGAAGACTAAAAAGTTGGAGGAAGAGTACTCCAATCTTAAGAATCTTCATGAAACCACCCTTCTCCAGAAATGCCACCTTCAGACTCGGGTGTTGAATCTGGAGGAGCAGCTTTTGGAAGCAAAGAAGGAGATTCAGCAGCTACAAGAGCGTGGTGAAAGAGCTCCAACCAAACACTTACTGGAAGCTGTGAACCCACCATTTCTTGGAGAGTTTAGGGTGGAAGACTATGATTATGCTGATGTCTTTTACATTCCGGAGACTCATTACATCAGTGGAATGGAGTGGATTAATTTCTAA 468 0.4338 MGSTKKRKLSAEQVSLLEKNFCIQHKLQSERKDQLAFELGMDPRQVAVWFQNRRFRWKTKKLEEEYSNLKNLHETTLLQKCHLQTRVLNLEEQLLEAKKEIQQLQERGERAPTKHLLEAVNPPFLGEFRVEDYDYADVFYIPETHYISGMEWINF* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03962 155 Coils Coil 87 107 - -
Phac3g03962 155 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 107 IPR045224 GO:0003700
Phac3g03962 155 Pfam Homeodomain 5 58 IPR001356 GO:0003677
Phac3g03962 155 Gene3D - 1 68 - -
Phac3g03962 155 ProSitePatterns 'Homeobox' domain signature. 35 58 IPR017970 GO:0000981|GO:0006355
Phac3g03962 155 CDD homeodomain 5 61 IPR001356 GO:0003677
Phac3g03962 155 ProSiteProfiles 'Homeobox' domain profile. 1 60 IPR001356 GO:0003677
Phac3g03962 155 SMART HOX_1 3 64 IPR001356 GO:0003677
Phac3g03962 155 Coils Coil 52 72 - -
Phac3g03962 155 SUPERFAMILY Homeodomain-like 4 68 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03962 Phac-Chr3 39273756 39275008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03962 2 155 Homeobox Transcription Factor Family AT4G36740 50.920 3.08e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Phac3g03962 Homeodomain 4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03962 K09338 - gmx:100803948 241.891