Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03950 ATGGGAATAGCAACACCATCTTCTTCGCTTCCTTCTATAATCTCTCACTCCAAGACACACCAGCAACACCATTCGAATTCTATGTCCCAAGATTACCACCACCACCAAGGAATCTTCAGCTTCCCCAATGGGTTCGAGAGATCGGCTACAACGATGAGTCACCAAGACCCTCACCAACAACAGCAGCAACAGCAGCAGCAGATTCGTAGGGACAAAGTGAGGGTGCAAGGCTTCGAGCCACAACAAACTTTGGTCCCCATAGAGGAAGACGAACCGGGAAGTCTACCGGTGTACGAAACTGCGGGGATGTTATCGGAGATGTTCACTTTCCCTCCCGGCGCCGCCACAGAATTACTGGAGCAACAGCAACAGCAGCCACAGCAGCAACAGCCAATGACGACGACGTTTCGGTCGTCGGCGAGAGCAGTGGGCAGTGGTGGCAGCGAGTGGTACGGAAACAGACAAGGGATGCTAACCGGGTTGGGACCGTTGGGAGATTCCAAGAATCATCATCATCATGGCAGTGTGAATAGCCGTGACAGTAGCAGCAGCAGCATAGTTCAGCAGCATCAGCATCATCATCATCACCACAACCACCATCATCACCATCAGATGTCGAGCATTAATGCAGACTCTGCAGCTGCCATGCAGCTTTTTCTCATGAACCCGCAAACCACCAGATCCCCTTCTCCCCCTCCTCCTCCTTCTTCCACACTCCACATGTTACTTCCCACTTTTCCTCCGGGCTCAGGAGGGTCTTTTGGTCAATTCACGTGGCTCCCTGACACTGCTCAAGATGGAGGAGGACCCAGTACGGTTGTGGAAGGCCCCGGTCACGGCCAAGGTCTTTCCTTATCCTTGTCCTCCTCCTTAGAAGCTGCGAAAGCGGAGGAACTTAGGATGGGGGATAGTGGATTTTTGTATTACAATCAAGCTAGTGGAGGACCCTCTTCCTATAAGAGTGCTCTTGGGGGTCATCATCACCAAGCATTGTTGGGACAGACCCACCAGGGGCATGTTGCCTTTGCAGCATCATCCTCCACCTCATCCTTAGGTGTTGTCAATGCCTTGAGGAATTCGAAGTATATTAAGGCTGCTCAGGAATTGCTTGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTCAAGAAGAACAAGTTCAATAGGCAACTCTCAAACCCTAGCTCCAATCATGGAGCTAGTGGCGGCGGCGGCGGTGCTTCCTCGTCTTTATCAAAGGATGTTCCTCCTTTGTCAGCAGCTGATAGGATTGAGCATCAAAGGAGGAAGGTCAAACTTCTAACAATGCTTGACGAGGTAGATCGGAGATACAGCCACTACTGCGAGCAAATGCACATGGTGGTGAACTCGTTTGACATGGTAATGGGTTTTGGCTCTGCGGTTCCATACACAGCACTTGCACAGAAAGCAATGTCTCGTCACTTTAGGTGTCTAAAGGATGCCATAACAGCGCAACTGAAGCACAGTTGTGAGCTGTTGGGAGAGAAAGATGGGGCAGGGAACTCAGGGTTGACCAAAGGAGAGACCCCGAGGCTCAAGTTGCTTGAACAAAGTTTGAGACAGCAAAGAGCGTTTCATCAAATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGGTTGCCAGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTTCATCCGTACCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGGCTATCGAGAAATCAGGTATCAAACTGGTTCATTAATGCAAGGGTTCGATTGTGGAAACCCATGGTGGAAGACATGTACCAACAAGAACTCAAGGAAGCTGAAGGGGCAGAAGACGAGAGAGAGGGGAATCAAAGCAGCAGCAATAACAGTGGCCACCAACTGGCACAAACCCCAACACCCTCCACCACGGCATCGACAGCAACAGCGCCACCACCGCCTCCAACAACATCTACAGCGACCACACCACCAACCGCCAAAAGATCCGACACCGAAAGCGACGCTTCACTCGCCCCAATAAATAACAACAGGCCACAGGGAGCCTTCTCGGAAACACAACCCAACTCCTCCACCACCGCCACCGCCTCAGAGGTGGCGCCTCCCTCGGAGCTTTCCCGGTCAATGGGGGCTGATGACTCGTGCCGGCACGGTAGCCTCGTTGTGACGGATTTTGGGACCGGTCCTGGCGCTTCTGACATTGGTTCCGCACTGATTAGATTTGGGACCACCGCCGGTGACGTGTCACTTACACTAGGGCTACGTCACGCCGGGAACATGCCGGAGAAAACTCCGTTCTCCGTTAGGGACTTTGGAGGCATTTAA 2346 0.5213 MGIATPSSSLPSIISHSKTHQQHHSNSMSQDYHHHQGIFSFPNGFERSATTMSHQDPHQQQQQQQQQIRRDKVRVQGFEPQQTLVPIEEDEPGSLPVYETAGMLSEMFTFPPGAATELLEQQQQQPQQQQPMTTTFRSSARAVGSGGSEWYGNRQGMLTGLGPLGDSKNHHHHGSVNSRDSSSSSIVQQHQHHHHHHNHHHHHQMSSINADSAAAMQLFLMNPQTTRSPSPPPPPSSTLHMLLPTFPPGSGGSFGQFTWLPDTAQDGGGPSTVVEGPGHGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNQASGGPSSYKSALGGHHHQALLGQTHQGHVAFAASSSTSSLGVVNALRNSKYIKAAQELLEEFCSVGRGQFKKNKFNRQLSNPSSNHGASGGGGGASSSLSKDVPPLSAADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMHMVVNSFDMVMGFGSAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGNSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGAEDEREGNQSSSNNSGHQLAQTPTPSTTASTATAPPPPPTTSTATTPPTAKRSDTESDASLAPINNNRPQGAFSETQPNSSTTATASEVAPPSELSRSMGADDSCRHGSLVVTDFGTGPGASDIGSALIRFGTTAGDVSLTLGLRHAGNMPEKTPFSVRDFGGI* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03950 781 MobiDBLite consensus disorder prediction 386 414 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 662 709 - -
Phac3g03950 781 FunFam BEL1-like homeodomain protein 4 545 607 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 43 68 - -
Phac3g03950 781 Pfam Homeobox KN domain 559 598 IPR008422 GO:0003677|GO:0006355
Phac3g03950 781 CDD homeodomain 542 603 IPR001356 GO:0003677
Phac3g03950 781 Gene3D - 545 607 - -
Phac3g03950 781 SMART prehox3 351 490 IPR006563 -
Phac3g03950 781 MobiDBLite consensus disorder prediction 613 719 - -
Phac3g03950 781 Pfam Associated with HOX 357 489 IPR006563 -
Phac3g03950 781 SMART HOX_1 542 606 IPR001356 GO:0003677
Phac3g03950 781 MobiDBLite consensus disorder prediction 119 208 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 189 203 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 386 421 - -
Phac3g03950 781 ProSiteProfiles 'Homeobox' domain profile. 539 602 IPR001356 GO:0003677
Phac3g03950 781 MobiDBLite consensus disorder prediction 647 661 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 624 646 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 226 241 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 1 36 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 1 68 - -
Phac3g03950 781 MobiDBLite consensus disorder prediction 119 142 - -
Phac3g03950 781 SUPERFAMILY Homeodomain-like 544 609 IPR009057 -
Phac3g03950 781 MobiDBLite consensus disorder prediction 223 283 - -
Phac3g03950 781 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 193 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03950 Phac-Chr3 39067887 39076170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03950 351 781 Homeobox Transcription Factor Family AT2G23760 54.415 8.06e-149 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Phac3g03950 POX 2.1e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03950 - - gmx:100814959 1148.65