Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03947 ATGGGAATAGCAACACCATCTTCTTCGCTTCCTTCTATAATCTCTCACTCCAAGACACACCAGCAACACCATTCGAATTCTATGTCCCAAGATTACCACCACCACCAAGGAATCTTCAGCTTCCCCAATGGGTTCGAGAGATCGGCTACAACGATGAGTCACCAAGACCCTCACCAACAACAGCAGCAACAGCAGCAGCAGATTCGTAGGGACAAAGTGAGGGTGCAAGGCTTCGAGCCACAACAAACTTTGGTCCCCATAGAGGAAGACGAACCGGGAAGTCTACCGGTGTACGAAACTGCGGGGATGTTATCGGAGATGTTCACTTTCCCTCCCGGCGCCGCCACAGAATTACTGGAGCAACAGCAACAGCAGCCACAGCAGCAACAGCCAATGACGACGACGTTTCGGTCGTCGGCGAGAGCAGTGGGCAGTGGTGGCAGCGAGTGGTACGGAAACAGACAAGGGATGCTAACCGGGTTGGGACCGTTGGGAGATTCCAAGAATCATCATCATCATGGCAGTGTGAATAGCCGTGACAGTAGCAGCAGCAGCATAGTTCAGCAGCATCAGCATCATCATCATCACCACAACCACCATCATCACCATCAGATGTCGAGCATTAATGCAGACTCTGCAGCTGCCATGCAGCTTTTTCTCATGAACCCGCAAACCACCAGATCCCCTTCTCCCCCTCCTCCTCCTTCTTCCACACTCCACATGTTACTTCCCACTTTTCCTCCGGGCTCAGGAGGGTCTTTTGGTCAATTCACGTGGCTCCCTGACACTGCTCAAGATGGAGGAGGACCCAGTACGGTTGTGGAAGGCCCCGGTCACGGCCAAGGTCTTTCCTTATCCTTGTCCTCCTCCTTAGAAGCTGCGAAAGCGGAGGAACTTAGGATGGGGGATAGTGGATTTTTGTATTACAATCAAGCTAGTGGAGGACCCTCTTCCTATAAGAGTGCTCTTGGGGGTCATCATCACCAAGCATTGTTGGGACAGACCCACCAGGGGCATGTTGCCTTTGCAGCATCATCCTCCACCTCATCCTTAGGTGTTGTCAATGCCTTGAGGAATTCGAAGTATATTAAGGCTGCTCAGGAATTGCTTGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTCAAGAAGAACAAGTTCAATAGGCAACTCTCAAACCCTAGCTCCAATCATGGAGCTAGTGGCGGCGGCGGCGGTGCTTCCTCGTCTTTATCAAAGGATGTTCCTCCTTTGTCAGCAGCTGATAGGATTGAGCATCAAAGGAGGAAGGTCAAACTTCTAACAATGCTTGACGAGGTAGATCGGAGATACAGCCACTACTGCGAGCAAATGCACATGGTGGTGAACTCGTTTGACATGGTAATGGGTTTTGGCTCTGCGGTTCCATACACAGCACTTGCACAGAAAGCAATGTCTCGTCACTTTAGGTGTCTAAAGGATGCCATAACAGCGCAACTGAAGCACAGTTGTGAGCTGTTGGGAGAGAAAGATGGGGCAGGGAACTCAGGGTTGACCAAAGGAGAGACCCCGAGGCTCAAGTTGCTTGAACAAAGTTTGAGACAGCAAAGAGCGTTTCATCAAATGGGGATGATGGAACAGGAAGCTTGGAGACCCCAGAGAGGGTTGCCAGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTCGAGCATTTCCTTCATCCGTACCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACTGGGCTATCGAGAAATCAGGTTCGTCCCCTCCACTCTTAG 1782 0.5095 MGIATPSSSLPSIISHSKTHQQHHSNSMSQDYHHHQGIFSFPNGFERSATTMSHQDPHQQQQQQQQQIRRDKVRVQGFEPQQTLVPIEEDEPGSLPVYETAGMLSEMFTFPPGAATELLEQQQQQPQQQQPMTTTFRSSARAVGSGGSEWYGNRQGMLTGLGPLGDSKNHHHHGSVNSRDSSSSSIVQQHQHHHHHHNHHHHHQMSSINADSAAAMQLFLMNPQTTRSPSPPPPPSSTLHMLLPTFPPGSGGSFGQFTWLPDTAQDGGGPSTVVEGPGHGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNQASGGPSSYKSALGGHHHQALLGQTHQGHVAFAASSSTSSLGVVNALRNSKYIKAAQELLEEFCSVGRGQFKKNKFNRQLSNPSSNHGASGGGGGASSSLSKDVPPLSAADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMHMVVNSFDMVMGFGSAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGNSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVRPLHS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03947 593 MobiDBLite consensus disorder prediction 386 414 - -
Phac3g03947 593 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 192 588 - -
Phac3g03947 593 MobiDBLite consensus disorder prediction 43 68 - -
Phac3g03947 593 SMART prehox3 351 490 IPR006563 -
Phac3g03947 593 Gene3D - 548 590 - -
Phac3g03947 593 MobiDBLite consensus disorder prediction 189 203 - -
Phac3g03947 593 MobiDBLite consensus disorder prediction 119 208 - -
Phac3g03947 593 MobiDBLite consensus disorder prediction 386 421 - -
Phac3g03947 593 SUPERFAMILY Homeodomain-like 534 589 IPR009057 -
Phac3g03947 593 MobiDBLite consensus disorder prediction 226 241 - -
Phac3g03947 593 CDD homeodomain 542 589 IPR001356 GO:0003677
Phac3g03947 593 MobiDBLite consensus disorder prediction 1 68 - -
Phac3g03947 593 MobiDBLite consensus disorder prediction 1 36 - -
Phac3g03947 593 MobiDBLite consensus disorder prediction 119 142 - -
Phac3g03947 593 MobiDBLite consensus disorder prediction 223 283 - -
Phac3g03947 593 Pfam Associated with HOX 357 489 IPR006563 -
Phac3g03947 593 Pfam Homeobox KN domain 559 588 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03947 Phac-Chr3 39067887 39076170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03947 216 588 Homeobox Transcription Factor Family AT4G36870 60.808 2.94e-135 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03947 - - gmx:100814959 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03947 3 39067887 39076170 Phac3g03947 3 39067887 39076170 ECH
Phac3g03947 3 39067887 39076170 Phac2g02449 2 25966561 25975159 ECH
Phac2g02449 2 25966561 25975159 Phac3g03947 3 39067887 39076170 PCT