Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03922 ATGTTTCACTACAACACTAAGTTCGCTCTGCTTCTCGCCGTCTTCGTTTTCTGTTCAACGATCGCCGAAACCAACACCAACTGCACGCGCAGTTGCGGACAACACTCCCTGCAATACCCTTTTGGGTTCTCTTCTGGCTGCAAACTCAAACTAAACTGCAGCAACGACAACATCAAAATCAAAATCGGCGAGTTCGAGGTTCAGAATATAACCTCTGATAGCATACTCGTGAGTCTTCCGGTGAAGTGCAACCGCAGCATGGGAATCATAGACCCTCTTTTCGGTGTCAACTTTGCTCCTACGTTCAACAATAGCTTTCTGTTGCAGGGTTGCAAGTCCAAGCTCAATGGCTGCGATATTCCCCCATCGAGTTTCGTTGGCGAGCACAACCCGGTGGAGGGGTGTGGCCGGAAGAACGAAAGTGAAGATTTTATTTGCTTCACGCAGTTGCAGCGTAATAGTTCGCGTGAAGATGTGCTCGCGCAGCGAGATTTGAAGGGAAGTGGGTGTAGCTTCTTGTTTTCTGCTCTTGCTTATGATAAGAGTAAAGGGAAAGAGCTTTTGCTTCAATTACAGATGGTTGAGTTGGGGTGGTGGCTTAAAGGGTCGTGTAATTGTTCAAACAATGCATCCTGCACGAAGATCAATGCCAGAGGAGAACAAGGTTACCGGTGTCAATGCCATGAAGGTTTCGTCGGCGACGGTTTCAAAGACGGCGATGGTTGCCGGAGTATTCCTCCTCAATGCAAAGCTTCAACACTAAGGTCTGGCGGATGTAGAAAAGCAATCAAAATTGGTGTCCTTGTTGGAGGGATCATAATTGCGACTACCCTGGTAGTTGCTCTGTCTCTTCTATGTTACTTTACTAGGCGTCGTTCCTCTTGGCTGAGAAAACAATTGACAGTAAAGCGCCTATTACGAGAAGCTGGAGGCGACTCTACTGTTCCTCTATATCCCTACAAAGAAATAGAAAGGGCCACAAATTTTTTCGATGAAAAACATAGGTTGGGAACTGGGGCTTTTGGCACAGTTTATGCTGGACACCTTCACAATGACGAGTGCGTTGCTATAAAAAAGATTAAGTATAGAGACACCAACAGTGTTGACCAAGTCATAAACGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAACTTAGTGCGCCTCCTAGGTTGTTGCATAGAAGGGGGAGAGCAGATACTTGTGTATGAGTTTATGCCCAATGGAACACTATCTCAACATTTGCAAAGAGAGAGGGGCGGAGCACTTCCTTGGACAGTAAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATACCTTCATTCTGCAATTAACCCTCCAATATATCACAGAGACATAAAATCCAGCAACATACTCTTGGACTATAGTTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATCTCAACCGCCCCACAGGGGACCCCGGGCTATGTTGATCCCCAATACCACCAGAACTTCCACCTTTCTGATAAGAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTAGTTGATTTTTCGCGACCTAAAAGTGAAATCAATTTGGCTGCACTTGCAGTTGAAAGGATTAGGAGGGCTTGTCTAGATGAAATTATTGACCCCTTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCTGTGCACAAGGTGTCTGAGCTTGCATTTAGATGCCTTTCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTTGAACTTATCAGACGCAGTGAGTGGGAAAATTTGGAGGAAACCATATGCACAGCTTCATCGGTTGGGTCCGTGTGTTCATCCCCTCGAATAAGAAGAGAGAATTCAGTGGTTGGTGTTAGTTTTGAGAGAGTTCCAGGGCAAGGGAGTGAGATATTGATTGTTCCACCCAAGACTGAAATGTTTTTGCAATCAATGAAGGAAGTGAAGGACAGCTCTCCTGTATCTGTGCATGATGCTTGGCTAAGTGGAACTAGCTCACCTTCAACAATTGCTAGTTAG 2085 0.4528 MFHYNTKFALLLAVFVFCSTIAETNTNCTRSCGQHSLQYPFGFSSGCKLKLNCSNDNIKIKIGEFEVQNITSDSILVSLPVKCNRSMGIIDPLFGVNFAPTFNNSFLLQGCKSKLNGCDIPPSSFVGEHNPVEGCGRKNESEDFICFTQLQRNSSREDVLAQRDLKGSGCSFLFSALAYDKSKGKELLLQLQMVELGWWLKGSCNCSNNASCTKINARGEQGYRCQCHEGFVGDGFKDGDGCRSIPPQCKASTLRSGGCRKAIKIGVLVGGIIIATTLVVALSLLCYFTRRRSSWLRKQLTVKRLLREAGGDSTVPLYPYKEIERATNFFDEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVINEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRERGGALPWTVRLTIATETANAIAYLHSAINPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFSRPKSEINLAALAVERIRRACLDEIIDPFLEPHRDAWTLYSVHKVSELAFRCLSFHSDMRPTMIEVAEELELIRRSEWENLEETICTASSVGSVCSSPRIRRENSVVGVSFERVPGQGSEILIVPPKTEMFLQSMKEVKDSSPVSVHDAWLSGTSSPSTIAS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03922 694 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Phac3g03922 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Phac3g03922 694 Gene3D Laminin 198 238 - -
Phac3g03922 694 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03922 694 Pfam Wall-associated receptor kinase galacturonan-binding 28 75 IPR025287 GO:0030247
Phac3g03922 694 Pfam Protein kinase domain 331 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03922 694 FunFam Wall-associated receptor kinase-like 14 297 405 - -
Phac3g03922 694 Gene3D Transferase(Phosphotransferase) domain 1 406 624 - -
Phac3g03922 694 FunFam Wall-associated receptor kinase-like 20 406 615 - -
Phac3g03922 694 Gene3D Phosphorylase Kinase; domain 1 292 405 - -
Phac3g03922 694 SUPERFAMILY Protein kinase-like (PK-like) 313 605 IPR011009 -
Phac3g03922 694 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 686 IPR044652 GO:0004672
Phac3g03922 694 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03922 Phac-Chr3 38892046 38896458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03922 8 691 Receptor kinase-like Gene Family AT2G23450 53.546 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac3g03922 Pkinase 7.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03922 - - gmx:100810861 1104.74