Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03921 ATGTTTCACTACAACACTAAGTTCGCTCTGCTTCTCGCCGTCTTCGTTTTCTGTTCAACGATCGCCGAAACCAACACCAACTGCACGCGCAGTTGCGGACAACACTCCCTGCAATACCCTTTTGGGTTCTCTTCTGGCTGCAAACTCAAACTAAACTGCAGCAACGACAACATCAAAATCAAAATCGGCGAGTTCGAGGTTCAGAATATAACCTCTGATAGCATACTCGTGAGTCTTCCGGTGAAGTGCAACCGCAGCATGGGAATCATAGACCCTCTTTTCGGTGTCAACTTTGCTCCTACGTTCAACAATAGCTTTCTGTTGCAGGGTTGCAAGTCCAAGCTCAATGGCTGCGATATTCCCCCATCGAGTTTCGTTGGCGAGCACAACCCGGTGGAGGGGTGTGGCCGGAAGAACGAAAGTGAAGATTTTATTTGCTTCACGCAGTTGCAGCGTAATAGTTCGCGTGAAGATGTGCTCGCGCAGCGAGATTTGAAGGGAAGTGGGTGTAGCTTCTTGTTTTCTGCTCTTGCTTATGATAAGAGTAAAGGGAAAGAGCTTTTGCTTCAATTACAGATGGTTGAGTTGGGGTGGTGGCTTAAAGGGTCGTGTAATTGTTCAAACAATGCATCCTGCACGAAGATCAATGCCAGAGGAGAACAAGGTTACCGGTGTCAATGCCATGAAGGTTTCGTCGGCGACGGTTTCAAAGACGGCGATGGTTGCCGGAGTACCTTCTCATCAGTTCCTCCTCAATGCAAAGCTTCAACACTAAGGTCTGGCGGATGTAGAAAAGCAATCAAAATTGGTGTCCTTGTTGGAGGGATCATAATTGCGACTACCCTGGTAGTTGCTCTGTCTCTTCTATGTTACTTTACTAGGCGTCGTTCCTCTTGGCTGAGAAAACAATTGACAGTAAAGCGCCTATTACGAGAAGCTGGAGGCGACTCTACTGTTCCTCTATATCCCTACAAAGAAATAGAAAGGGCCACAAATTTTTTCGATGAAAAACATAGGTTGGGAACTGGGGCTTTTGGCACAGTTTATGCTGGACACCTTCACAATGACGAGTGCGTTGCTATAAAAAAGATTAAGTATAGAGACACCAACAGTGTTGACCAAGTCATAAACGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAACTTAGTGCGCCTCCTAGGTTGTTGCATAGAAGGGGGAGAGCAGATACTTGTGTATGAGTTTATGCCCAATGGAACACTATCTCAACATTTGCAAAGAGAGAGGGGCGGAGCACTTCCTTGGACAGTAAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATACCTTCATTCTGCAATTAACCCTCCAATATATCACAGAGACATAAAATCCAGCAACATACTCTTGGACTATAGTTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATCTCAACCGCCCCACAGGGGACCCCGGGCTATGTTGATCCCCAATACCACCAGAACTTCCACCTTTCTGATAAGAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTAGTTGATTTTTCGCGACCTAAAAGTGAAATCAATTTGGCTGCACTTGCAGTTGAAAGGATTAGGAGGGCTTGTCTAGATGAAATTATTGACCCCTTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCTGTGCACAAGGTGTCTGAGCTTGCATTTAGATGCCTTTCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTTGAACTTATCAGACGCAGTGAGTGGGAAAATTTGGAGGAAACCATATGCACAGCTTCATCGGTTGGGTCCGTGTGTTCATCCCCTCGAATAAGAAGAGAGAATTCAGTGGTTGGTGTTAGTTTTGAGAGAGTTCCAGGGCAAGGGAGTGAGATATTGATTGTTCCACCCAAGACTGAAATGTTTTTGCAATCAATGAAGGAAGTGAAGGACAGCTCTCCTGTATCTGTGCATGATGCTTGGCTAAGTGGAACTAGCTCACCTTCAACAATTGCTAGTTAG 2097 0.453 MFHYNTKFALLLAVFVFCSTIAETNTNCTRSCGQHSLQYPFGFSSGCKLKLNCSNDNIKIKIGEFEVQNITSDSILVSLPVKCNRSMGIIDPLFGVNFAPTFNNSFLLQGCKSKLNGCDIPPSSFVGEHNPVEGCGRKNESEDFICFTQLQRNSSREDVLAQRDLKGSGCSFLFSALAYDKSKGKELLLQLQMVELGWWLKGSCNCSNNASCTKINARGEQGYRCQCHEGFVGDGFKDGDGCRSTFSSVPPQCKASTLRSGGCRKAIKIGVLVGGIIIATTLVVALSLLCYFTRRRSSWLRKQLTVKRLLREAGGDSTVPLYPYKEIERATNFFDEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVINEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRERGGALPWTVRLTIATETANAIAYLHSAINPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFSRPKSEINLAALAVERIRRACLDEIIDPFLEPHRDAWTLYSVHKVSELAFRCLSFHSDMRPTMIEVAEELELIRRSEWENLEETICTASSVGSVCSSPRIRRENSVVGVSFERVPGQGSEILIVPPKTEMFLQSMKEVKDSSPVSVHDAWLSGTSSPSTIAS* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03921 698 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 690 IPR044652 GO:0004672
Phac3g03921 698 ProSiteProfiles Protein kinase domain profile. 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03921 698 Gene3D Laminin 198 238 - -
Phac3g03921 698 Gene3D Transferase(Phosphotransferase) domain 1 410 628 - -
Phac3g03921 698 Pfam Wall-associated receptor kinase galacturonan-binding 28 75 IPR025287 GO:0030247
Phac3g03921 698 SUPERFAMILY Protein kinase-like (PK-like) 317 609 IPR011009 -
Phac3g03921 698 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Phac3g03921 698 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Phac3g03921 698 Pfam Protein kinase domain 335 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03921 698 FunFam Wall-associated receptor kinase-like 20 410 619 - -
Phac3g03921 698 Gene3D Phosphorylase Kinase; domain 1 296 409 - -
Phac3g03921 698 FunFam Wall-associated receptor kinase-like 14 301 409 - -
Phac3g03921 698 SMART serkin_6 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03921 Phac-Chr3 38892046 38896458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03921 8 695 Receptor kinase-like Gene Family AT2G23450 53.237 0.0 694
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac3g03921 Pkinase 7.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03921 - - gmx:100810861 1102.04