Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03920 ATGTTTCACTACAACACTAAGTTCGCTCTGCTTCTCGCCGTCTTCGTTTTCTGTTCAACGATCGCCGAAACCAACACCAACTGCACGCGCAGTTGCGGACAACACTCCCTGCAATACCCTTTTGGGTTCTCTTCTGGCTGCAAACTCAAACTAAACTGCAGCAACGACAACATCAAAATCAAAATCGGCGAGTTCGAGGTTCAGAATATAACCTCTGATAGCATACTCGTGAGTCTTCCGGTGAAGTGCAACCGCAGCATGGGAATCATAGACCCTCTTTTCGGTGTCAACTTTGCTCCTACGTTCAACAATAGCTTTCTGTTGCAGGGTTGCAAGTCCAAGCTCAATGGCTGCGATATTCCCCCATCGAGTTTCGTTGGCGAGCACAACCCGGTGGAGGGGTGTGGCCGGAAGAACGAAAGTGAAGATTTTATTTGCTTCACGCAGTTGCAGCGTAATAGTTCGCGTGAAGATGTGCTCGCGCAGCGAGATTTGAAGGGAAGTGGGTGTAGCTTCTTGTTTTCTGCTCTTGCTTATGATAAGAGTAAAGGGAAAGAGCTTTTGCTTCAATTACAGATGGTTGAGTTGGGGTGGTGGCTTAAAGGGTCGTGTAATTGTTCAAACAATGCATCCTGCACGAAGATCAATGCCAGAGGAGAACAAGGTTACCGGTGTCAATGCCATGAAGGTTTCGTCGGCGACGGTTTCAAAGACGGCGATGGTTGCCGGAGTAGTGAGTCTCATTCAATCACACTTCCTCCTCAATGCAAAGCTTCAACACTAAGGTCTGGCGGATGTAGAAAAGCAATCAAAATTGGTGTCCTTGTTGGAGGGATCATAATTGCGACTACCCTGGTAGTTGCTCTGTCTCTTCTATGTTACTTTACTAGGCGTCGTTCCTCTTGGCTGAGAAAACAATTGACAGTAAAGCGCCTATTACGAGAAGCTGGAGGCGACTCTACTGTTCCTCTATATCCCTACAAAGAAATAGAAAGGGCCACAAATTTTTTCGATGAAAAACATAGGTTGGGAACTGGGGCTTTTGGCACAGTTTATGCTGGACACCTTCACAATGACGAGTGCGTTGCTATAAAAAAGATTAAGTATAGAGACACCAACAGTGTTGACCAAGTCATAAACGAGATCAAGCTCCTTTCTTCAGTGAGTCACCCAAACTTAGTGCGCCTCCTAGGTTGTTGCATAGAAGGGGGAGAGCAGATACTTGTGTATGAGTTTATGCCCAATGGAACACTATCTCAACATTTGCAAAGAGAGAGGGGCGGAGCACTTCCTTGGACAGTAAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATACCTTCATTCTGCAATTAACCCTCCAATATATCACAGAGACATAAAATCCAGCAACATACTCTTGGACTATAGTTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATCTCAACCGCCCCACAGGGGACCCCGGGCTATGTTGATCCCCAATACCACCAGAACTTCCACCTTTCTGATAAGAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACTGCCATGAAAGTAGTTGATTTTTCGCGACCTAAAAGTGAAATCAATTTGGCTGCACTTGCAGTTGAAAGGATTAGGAGGGCTTGTCTAGATGAAATTATTGACCCCTTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCTGTGCACAAGGTGTCTGAGCTTGCATTTAGATGCCTTTCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTTGAACTTATCAGACGCAGTGAGTGGGAAAATTTGGAGGAAACCATATGCACAGCTTCATCGGTTGGGTCCGTGTGTTCATCCCCTCGAATAAGAAGAGAGAATTCAGTGGTTGGTGTTAGTTTTGAGAGAGTTCCAGGGCAAGGGAGTGAGATATTGATTGTTCCACCCAAGACTGAAATGTTTTTGCAATCAATGAAGGAAGTGAAGGACAGCTCTCCTGTATCTGTGCATGATGCTTGGCTAAGTGGAACTAGCTCACCTTCAACAATTGCTAGTTAG 2106 0.4525 MFHYNTKFALLLAVFVFCSTIAETNTNCTRSCGQHSLQYPFGFSSGCKLKLNCSNDNIKIKIGEFEVQNITSDSILVSLPVKCNRSMGIIDPLFGVNFAPTFNNSFLLQGCKSKLNGCDIPPSSFVGEHNPVEGCGRKNESEDFICFTQLQRNSSREDVLAQRDLKGSGCSFLFSALAYDKSKGKELLLQLQMVELGWWLKGSCNCSNNASCTKINARGEQGYRCQCHEGFVGDGFKDGDGCRSSESHSITLPPQCKASTLRSGGCRKAIKIGVLVGGIIIATTLVVALSLLCYFTRRRSSWLRKQLTVKRLLREAGGDSTVPLYPYKEIERATNFFDEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVINEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEFMPNGTLSQHLQRERGGALPWTVRLTIATETANAIAYLHSAINPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFSRPKSEINLAALAVERIRRACLDEIIDPFLEPHRDAWTLYSVHKVSELAFRCLSFHSDMRPTMIEVAEELELIRRSEWENLEETICTASSVGSVCSSPRIRRENSVVGVSFERVPGQGSEILIVPPKTEMFLQSMKEVKDSSPVSVHDAWLSGTSSPSTIAS* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03920 701 Gene3D Laminin 198 238 - -
Phac3g03920 701 ProSiteProfiles Protein kinase domain profile. 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03920 701 FunFam Wall-associated receptor kinase-like 14 304 412 - -
Phac3g03920 701 SMART serkin_6 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03920 701 SUPERFAMILY Protein kinase-like (PK-like) 320 612 IPR011009 -
Phac3g03920 701 Gene3D Phosphorylase Kinase; domain 1 299 412 - -
Phac3g03920 701 ProSitePatterns Protein kinases ATP-binding region signature. 343 366 IPR017441 GO:0005524
Phac3g03920 701 Gene3D Transferase(Phosphotransferase) domain 1 413 631 - -
Phac3g03920 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Phac3g03920 701 Pfam Protein kinase domain 338 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03920 701 Pfam Wall-associated receptor kinase galacturonan-binding 28 75 IPR025287 GO:0030247
Phac3g03920 701 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 693 IPR044652 GO:0004672
Phac3g03920 701 FunFam Wall-associated receptor kinase-like 20 413 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03920 Phac-Chr3 38892046 38896458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03920 8 698 Receptor kinase-like Gene Family AT2G23450 53.009 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phac3g03920 Pkinase 7.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03920 - - gmx:100810861 1100.5