Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03884 ATGGAAGAGATCACAAAAGGAGTTGGCTTTCGAAGGATCAATGGTCCCTTTGATGTTCCTGAAAAGCCAGAATTCAGTGTTGGATTGGATGCAGCATTGAGCAAGGTGAAGATGGAGCTTCTCAATGGACCTAAGTCCATCGTTGTATTGACTGGTTTTGGAGGATCTGGAAAAACCACTCTGGTTACTCTGCTCTGTTGGGATGAACAGATCAAGAGTAAGTCTAACTCTTTTTTGTTCTCTACTCTCATAAATAAACTAACTACCTCCCATATAGTAACAAAAAGACGTAAATTCAGGGAAAATATATTTTTTGTGACCTTTTCCAAAACGCCTAAGTTGAAGATCATCGTGGAAAGACTGTTTGAACATCTTGGATATGAAGTGCCTAAGTTTGAAAACGATGAAGAGGCAATTAATCAATTAGGACTTTTACTAAGGAAATTGAAGGGAAGAGTGTTGATGGTTCTGGATGATGTTTGGCCTGACTCAGAAGATCTGGTGGAGAAATTTAAATTCCATTTAGCAGATTATAAAATTTTGGTGACTTCAAGGGTTGCATTTCCAAGATTTGGCACCCCGTGTGTCTTAAAACCACTCCTTCACCAACATGCAATCACCCTTTTCCGTCACTATGCTCTCTTGGATAGCAACAGTTTAAATATTCCACACGAAGATGTAGTCCAAAAGGTTGTGAAAAGTTGCATGGGTTTACCACTTGCCATTAAAGTAATTGGTAGGTCACTCAGTCATGGACCAAATGAGTTATGGCAAAAGATGGTGTTGGAATTGTCACATGGTAATTCCATACTTAATTGTAACACTGAATTGCTAACCTACCTCCCTAAGATCTTAGATGTACTGGAAGATAGTAGAGTCATCAAAGAGTGCTTCATGGACCTAGGCTTATTTCCTCAAGACCAAAGAATTCCTGTTACTGCTCTCATTGATATGTGGACAGAGTTGTATGGACTAGACAATGACGGCATAGAAGCAATGGAAATTATCAACAAATTACACTCCATGAATCTGGCTAATGTCTGCATAGCAAGGAAAAATACAAGTGACACAGACAATTATTACTACAATAACCATTTCATCGTCCTTCATGATCTTCTAAGAGAGCTGGCAATTTATGGAAGCACCCTGGAACCAATTGAAGAGAGAAAAAGACTGATTATTGGCACCAACGAAAATGAAAGTGAATGGGGGCTTGATGAGAAGCAACGAGGCATGGTGACCTGCATATTGTCAAATTGTTTTAAATATTGTGTTAAACAGAAACCCCAACAGATCACTGCTCGCACATTGTCCATATCAATTGATGAAAAGAGTTCTTCATATTGGTCACACATACATTCAGCTCAAGCAAAGGTTCTAATTTTAAATCTCCGAGTTAATCAGTACTCCTTTCCAAAATCCATGCAGAAAATGAGCAAACTAAAAGCTCTGATAATCACAAATTACAATTTCCATCCTTCTGAGCTGACCAATTTTGAACTACTTGCCTTTTTATCCAACCTGACAAGAATTAGATTAGAGAGGATTGCTGTTCTTTCATTTGTCACACTGAAGGCTCTTAGGAAACTATCTATATACAACATGAGTCATGCTTTTCAAGATGGTATAATTTCAGATGCATTTCCAAATCTAGTGGATTTGAACATTGACTATTGCAAAGATATGGTAGTGTTGCCAAGTGGTTTATGTGATATTATCCCACTGAAGAAGCTCAGTGTTACTAATTGCCACAAGCTCTTAGCACTGCCTCAAGAAATTGGTAAGTTGGTGCATTTGGAACTGCTAAGGGTCAGTTCTTGTACCGATTTGGAAAGGTTACCAGATTCTATTGGAAGGGTTCAAAATCTAACGCATCTTGACATCTCAAACTGCATAAGCCTTTGTAATTTACCAGAGGACGTTGGAAAATTGTGTAATCTAAGAAAGGTGAGCATGATAAATTGTGCAAGGTGTGAATTGCCATACTCAGTAGTGAATCTTGTGAATTTGAAGATAGTGAGTTGCGATGAAGAGACAGCTGCTTCATGGGAAGGGTTCAAAGCTATGCTTCCGAATCTACTGATAGAGGTGCCTCAAGTTGATGTTAACTTAAACTGGCTTCATTCATTCTCCATATACAAGAACTTCTTTGATCGTACAAACTTGTTCCTTGTTTTGAGAAAGAACTCGAAAAGTTGGTTATTCATGGAAGAGACAGCACAGCAAATCAAGCGTCCTTTTGGAATTCCTGAAAAGCCAGAATTCACTGTTGGGTTGGATGTACCATTGAGCAAGTTGAAAATAAATGTTCTCAGTGAAGGTGTGTCCGTAATTGTGTTGACCGGTTTGGGAGGATCGGGGAAAACCACTCTGGCGACAATGCTCTGTTGGGATGAACAAGTCATCGGTAAATTCAAGGAAAATATTTTATTTGTCACCTTCTCAAAAGCGCCCAATTTGAAGATTATTGTAGAAAGACTATTGGAACACTTTGGATATGAAGTACCAGAGTTTCAAAGCGATGAAGATGCAATTCATCAATTGGTACTTTTGCCGAGGAAAATTGATGCAAATCCAATGTTGTTGGTCCTGGATGATGTTTGGCCCGGCTCAGAAGCAGTTGTTGAGAAACTTAAATTTCAGATATTAGATTATAAAATTTTGGTGACTTCAAGGGTTGCATTTCCTGGACTTTGCACTTCACTCGTCTTAAAACCTCTTGTTCCTCAAGATGCAATAACACTTTTCCGACATCATGCTTTCTTGGAAAGAGGAAGTTCAAATATTCCTGACGAAGATCTTGTCCAAAAGGTGGTGAGACATTGCAATGGTTCACCCATTGCCATTAAAGTGATTGGTAGATCACTCAGTAATCAGTGTATTGAGTTGTGGCAAAAGATGGTGGAGGAGTTGTCACAAGGTTATTCTCTACTTGATTCTAACACTGAATTACTTACTTCCCTCCAAAAGATCTTGGATGTATTGGAAGATAATCCCATCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTCAACACCAAAGAATTCCTGTCGCTGCTCTCATTGATATGTGGGTAGAGTTGTATGGACTGGATAATTATGGCATAAAAGCAATTGCCATTGTCAACAGATTGGATTCCATGAATTTAGCAAATGTCTTAGTAACAAGGAAAAATACAAGTGACACGGACAGTTATTATTATACCAACCATTTCATCGTCGTTCATGATATTCTAAGAGACTTGGCACTTCATCAAAGCAACCAGGCTCAAATTGAACTGAGAAAAAGACTGATAATTGACATCAATGAGACTAGACCTGAAGGGTGTCTTGGAAAGAAGCAGCAAGGCATGATGATCCAAACATTGTCACAGAAAACCCAAAAGATAGCTGCCCGAACATTGTCTATATCAACTGGTTAG 3426 0.3867 MEEITKGVGFRRINGPFDVPEKPEFSVGLDAALSKVKMELLNGPKSIVVLTGFGGSGKTTLVTLLCWDEQIKSKSNSFLFSTLINKLTTSHIVTKRRKFRENIFFVTFSKTPKLKIIVERLFEHLGYEVPKFENDEEAINQLGLLLRKLKGRVLMVLDDVWPDSEDLVEKFKFHLADYKILVTSRVAFPRFGTPCVLKPLLHQHAITLFRHYALLDSNSLNIPHEDVVQKVVKSCMGLPLAIKVIGRSLSHGPNELWQKMVLELSHGNSILNCNTELLTYLPKILDVLEDSRVIKECFMDLGLFPQDQRIPVTALIDMWTELYGLDNDGIEAMEIINKLHSMNLANVCIARKNTSDTDNYYYNNHFIVLHDLLRELAIYGSTLEPIEERKRLIIGTNENESEWGLDEKQRGMVTCILSNCFKYCVKQKPQQITARTLSISIDEKSSSYWSHIHSAQAKVLILNLRVNQYSFPKSMQKMSKLKALIITNYNFHPSELTNFELLAFLSNLTRIRLERIAVLSFVTLKALRKLSIYNMSHAFQDGIISDAFPNLVDLNIDYCKDMVVLPSGLCDIIPLKKLSVTNCHKLLALPQEIGKLVHLELLRVSSCTDLERLPDSIGRVQNLTHLDISNCISLCNLPEDVGKLCNLRKVSMINCARCELPYSVVNLVNLKIVSCDEETAASWEGFKAMLPNLLIEVPQVDVNLNWLHSFSIYKNFFDRTNLFLVLRKNSKSWLFMEETAQQIKRPFGIPEKPEFTVGLDVPLSKLKINVLSEGVSVIVLTGLGGSGKTTLATMLCWDEQVIGKFKENILFVTFSKAPNLKIIVERLLEHFGYEVPEFQSDEDAIHQLVLLPRKIDANPMLLVLDDVWPGSEAVVEKLKFQILDYKILVTSRVAFPGLCTSLVLKPLVPQDAITLFRHHAFLERGSSNIPDEDLVQKVVRHCNGSPIAIKVIGRSLSNQCIELWQKMVEELSQGYSLLDSNTELLTSLQKILDVLEDNPIIKECFMDLALFPQHQRIPVAALIDMWVELYGLDNYGIKAIAIVNRLDSMNLANVLVTRKNTSDTDSYYYTNHFIVVHDILRDLALHQSNQAQIELRKRLIIDINETRPEGCLGKKQQGMMIQTLSQKTQKIAARTLSISTG* 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03884 1141 PRINTS Disease resistance protein signature 854 868 - -
Phac3g03884 1141 PRINTS Disease resistance protein signature 777 792 - -
Phac3g03884 1141 PRINTS Disease resistance protein signature 942 956 - -
Phac3g03884 1141 SUPERFAMILY RNI-like 436 721 - -
Phac3g03884 1141 Pfam NB-ARC domain 32 265 IPR002182 GO:0043531
Phac3g03884 1141 Pfam NB-ARC domain 773 992 IPR002182 GO:0043531
Phac3g03884 1141 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 19 707 IPR039203 GO:0050832
Phac3g03884 1141 Gene3D Ribonuclease Inhibitor 421 690 IPR032675 -
Phac3g03884 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 739 1008 IPR027417 -
Phac3g03884 1141 Gene3D - 907 991 IPR042197 -
Phac3g03884 1141 Gene3D - 10 188 IPR027417 -
Phac3g03884 1141 Gene3D - 735 895 IPR027417 -
Phac3g03884 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 301 IPR027417 -
Phac3g03884 1141 Gene3D - 992 1087 IPR036388 -
Phac3g03884 1141 Gene3D - 284 377 IPR036388 -
Phac3g03884 1141 Gene3D - 200 277 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03884 Phac-Chr3 38573154 38584450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03884 471 657 WRKY Transcription Factor Family AT4G12020 27.570 4.73e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03884 - - vun:114175480 1457.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03884 3 38573154 38584450 Phac3g03884 3 38573154 38584450 ECH
Phac2g02407 2 25664923 25670400 Phac3g03884 3 38573154 38584450 PCT