Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03871 ATGGAACTGAGCTTGGATTTGAGCTTGGCCTTTGTCCCCGGAAGAACCGTTTGTCAGATTCTTGGCGAGGTTGCTCAGAGCGAAGATGGGTCTCAGAGAACACCCACGTTTGAGGATTTTCTCCAAAAGTTGGAAGATGAGAAGAGGAAGATCGACTCCTTCAAACGTGAACTTCCTCTCTGCATGCTCCTTGTGAACGATGCTATTACTAAATTGAAAGAGGAGATAAATGGAGGAGTGAGAATGCACGAAGAACCCGTTGTTGAAGAATACATTCCACTTATGAAAACCAATTCTGAAGGAAGTGAGACTTTAAACATGGGTACAGAACGCAGTGACATGAAGAATTGGATCAACTCTTTTCGGCTATGGAACGTTGAAACCAAACCGAGGAATGAAGAGGATGGTCGATGTGTCCCCAACAATCCAAATCAAGCACAGAATGAGACCAACAAGAGTAGAGGAGCACCACTAGCATTAAATGGAAACAATCGTGTGTCAAAGACAGTGATGAGTGAAGACAAGGGGGTGTCACAGATTCCTAGCCTTGGTTTGATGAGACCAGTGTTTGAATTGAATAATAGAAAAACAGAAAGTGGTAATGAACATGGGTCGTCCTTGATTACAAGCTCATCAGAGATAAAGTGTGAAGCACCACCTCAGCAGAATCCGAGGAAACAAAGGCGATGCTGGTCACCAGAGCTTCATAGGCGATTTGTTGATGCCCTTCAACAATTAGGGGGACCACAAGTGGCCACTCCAAAGCAGATTAGAGAACTGATGCAGGTGGTAGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAGAAGTACAGACTTCATTTTAGAAGACCTCAAGTTTCCTCATTTGGGCAGGCTAATAGTGGCTTATGCCTGATGGTACAAGATAAATGTGGAGATAATAATAAATCAAGAGGGAACTTATCACAATCTGGCTCTCCACAAGGTCCTCTTTTCTTAGGAGGGTCTGGACGAAACAGCATGGACACAGAAGAAGATGAACAATCAGATTGCCACAATTGGAAAGGTGGCCTTCACCACCAACCAGAAGCTGAACTTTTATGA 1086 0.4392 MELSLDLSLAFVPGRTVCQILGEVAQSEDGSQRTPTFEDFLQKLEDEKRKIDSFKRELPLCMLLVNDAITKLKEEINGGVRMHEEPVVEEYIPLMKTNSEGSETLNMGTERSDMKNWINSFRLWNVETKPRNEEDGRCVPNNPNQAQNETNKSRGAPLALNGNNRVSKTVMSEDKGVSQIPSLGLMRPVFELNNRKTESGNEHGSSLITSSSEIKCEAPPQQNPRKQRRCWSPELHRRFVDALQQLGGPQVATPKQIRELMQVVGLTNDEVKSHLQKYRLHFRRPQVSSFGQANSGLCLMVQDKCGDNNKSRGNLSQSGSPQGPLFLGGSGRNSMDTEEDEQSDCHNWKGGLHHQPEAELL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03871 361 Gene3D - 225 283 - -
Phac3g03871 361 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 348 IPR044787 GO:0003700|GO:0006355
Phac3g03871 361 MobiDBLite consensus disorder prediction 309 361 - -
Phac3g03871 361 MobiDBLite consensus disorder prediction 309 324 - -
Phac3g03871 361 Coils Coil 37 57 - -
Phac3g03871 361 Pfam Myb-like DNA-binding domain 228 279 IPR001005 -
Phac3g03871 361 NCBIfam myb-like DNA-binding domain, SHAQKYF class 226 281 IPR006447 GO:0003677
Phac3g03871 361 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 223 283 IPR017930 -
Phac3g03871 361 MobiDBLite consensus disorder prediction 138 162 - -
Phac3g03871 361 SUPERFAMILY Homeodomain-like 224 284 IPR009057 -
Phac3g03871 361 MobiDBLite consensus disorder prediction 334 361 - -
Phac3g03871 361 MobiDBLite consensus disorder prediction 195 228 - -
Phac3g03871 361 MobiDBLite consensus disorder prediction 130 162 - -
Phac3g03871 361 MobiDBLite consensus disorder prediction 199 218 - -
Phac3g03871 361 FunFam Myb family transcription factor 225 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03871 Phac-Chr3 38531791 38534704 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03871 1 301 G2-like Transcription Factor Family AT2G03500 38.532 8.94e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g03871 Myb_DNA-binding 8.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03871 - - gmx:100794220 436.417