Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03870 ATGCACGAAGAACCCGTTGTTGAAGAATACATTCCACTTATGAAAACCAATTCTGAAGGAAGTGAGACTTTAAACATGGGTACAGAACGCAGTGACATGAAGAATTGGATCAACTCTTTTCGGCTATGGAACGTTGAAACCAAACCGAGGAATGAAGAGGATGGTCGATGTGTCCCCAACAATCCAAATCAAGCACAGAATGAGACCAACAAGAGTAGAGGAGCACCACTAGCATTAAATGGAAACAATCGTGTGTCAAAGACAGTGATGAGTGAAGACAAGGGGGTGTCACAGATTCCTAGCCTTGGTTTGATGAGACCAGTGTTTGAATTGAATAATAGAAAAACAGAAAGTGGTAATGAACATGGGTCGTCCTTGATTACAAGCTCATCAGAGATAAAGTGTGAAGCACCACCTCAGCAGAATCCGAGGAAACAAAGGCGATGCTGGTCACCAGAGCTTCATAGGCGATTTGTTGATGCCCTTCAACAATTAGGGGGACCACAAGTGGCCACTCCAAAGCAGATTAGAGAACTGATGCAGGTGGTAGGCCTGACAAATGATGAAGTGAAAAGCCATTTGCAGAAGTACAGACTTCATTTTAGAAGACCTCAAGTTTCCTCATTTGGGCAGGCTAATAGTGGCTTATGCCTGATGGTACAAGATAAATGTGGAGATAATAATAAATCAAGAGGGAACTTATCACAATCTGGCTCTCCACAAGGTCCTCTTTTCTTAGGAGGGTCTGGACGAAACAGCATGGACACAGAAGAAGATGAACAATCAGATTGCCACAATTGGAAAGGTGGCCTTCACCACCAACCAGAAGCTGAACTTTTATGA 843 0.433 MHEEPVVEEYIPLMKTNSEGSETLNMGTERSDMKNWINSFRLWNVETKPRNEEDGRCVPNNPNQAQNETNKSRGAPLALNGNNRVSKTVMSEDKGVSQIPSLGLMRPVFELNNRKTESGNEHGSSLITSSSEIKCEAPPQQNPRKQRRCWSPELHRRFVDALQQLGGPQVATPKQIRELMQVVGLTNDEVKSHLQKYRLHFRRPQVSSFGQANSGLCLMVQDKCGDNNKSRGNLSQSGSPQGPLFLGGSGRNSMDTEEDEQSDCHNWKGGLHHQPEAELL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03870 280 MobiDBLite consensus disorder prediction 118 137 - -
Phac3g03870 280 MobiDBLite consensus disorder prediction 228 243 - -
Phac3g03870 280 MobiDBLite consensus disorder prediction 228 280 - -
Phac3g03870 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 267 IPR044787 GO:0003700|GO:0006355
Phac3g03870 280 FunFam Myb family transcription factor 144 202 - -
Phac3g03870 280 Gene3D - 144 202 - -
Phac3g03870 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 142 202 IPR017930 -
Phac3g03870 280 Pfam Myb-like DNA-binding domain 147 198 IPR001005 -
Phac3g03870 280 MobiDBLite consensus disorder prediction 49 81 - -
Phac3g03870 280 MobiDBLite consensus disorder prediction 253 280 - -
Phac3g03870 280 MobiDBLite consensus disorder prediction 114 147 - -
Phac3g03870 280 MobiDBLite consensus disorder prediction 57 81 - -
Phac3g03870 280 SUPERFAMILY Homeodomain-like 143 203 IPR009057 -
Phac3g03870 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 145 200 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03870 Phac-Chr3 38531791 38534704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03870 5 220 G2-like Transcription Factor Family AT2G03500 40.598 6.59e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g03870 Myb_DNA-binding 5.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03870 - - gmx:100794220 347.821