Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03869 ATGACCCCATGCGGCGCGTGCAAGTATCAACGGCGGAGGTGCGGGGCGGATTGCCTTATGGCGCCGTATTTTCCGGCAGAGAGCATTCAGCGGTTTGCGTACGTTCACCATGTGTTCGGCGGGGGCAACGTGATTAACATTTTGAAGTCAACGAAGCCGGAGTTGCGGAAGTGGACGGCGAGGGCGCTGACGTACCAAGCGGAGGCGCGTGTGAGAGACCCCGTGCACGGGTGCGTTGGGGTGATACGGGAGCAGGAGGAGAGTCTTCGAATCCTGAAAGAGAAGCTGGAGAAGGCGAAAAGGGAAGTGGCCCAATACGTGGGCCCAGAGGTTGTGCAAAAGATGATTGAGCAGTGTTCCTCCAATCCGCATGCGAATATGATGGACCTTGAGGCTCCTCTCGCAGTCACCGCTGATGATGCTGATCTTTTTTCATGGGATCCTTTTCCGGCTTGGGAACCATCTTTTTTGCGGCTGCAGCCACCTCAAGGTGACGATGTTAAGGGTGAGACTGTTGCTCCTCCTTCTTGA 531 0.5593 MTPCGACKYQRRRCGADCLMAPYFPAESIQRFAYVHHVFGGGNVINILKSTKPELRKWTARALTYQAEARVRDPVHGCVGVIREQEESLRILKEKLEKAKREVAQYVGPEVVQKMIEQCSSNPHANMMDLEAPLAVTADDADLFSWDPFPAWEPSFLRLQPPQGDDVKGETVAPPS* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03869 176 Coils Coil 82 102 - -
Phac3g03869 176 ProSiteProfiles LOB domain profile. 2 103 IPR004883 -
Phac3g03869 176 Pfam Lateral organ boundaries (LOB) domain 3 100 IPR004883 -
Phac3g03869 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 122 - -
Phac3g03869 176 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03869 Phac-Chr3 38527836 38528990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03869 2 117 AS2 family AT5G66870 44.828 1.27e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac3g03869 LOB 1.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03869 - - gmx:102663028 192.971