Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03868 ATGTCGTCCATGAATTCGCCGTGCGCTGCGTGCAAGCTTCTGCGGCGGAAGTGCACGCAGGAGTGCGTGTTCGCGCCGTACTTTCCGCCGGATAACCCGCAACGGTTCGAGTGTGTGCACCGCGTGTTCGGCGCCAGCAACGTGTCGAAACTGCTGAACGAGCTCAGCGTGGCGCAGCGCGACGACGCCGTTAAGTCGCTGGCGTATGAGGCGGAGGCGCGATTGCGTGACCCCGTGTATGGCTGCGTGGGATTAATTTCGTTACTACAGCAACGGCTCCGTCAAATCCAAATGGAGCTTCACAGCGCGAAGAAGGAATTCTCCACTTATGTTAGTCCTCAGACCATGCAGATTCTCTTGGCCAATCCTGGGATGGTGCCACCTGCTGAGATTGTCGGGCCTCCTCCGCATCAACCTATGTTCAATCATGGAGGCAACAACATGGTGCCGCAGCAGATTTTGGTTGGCCATGGCGGTGGCCAGACGGTGGTTCGCGACCCTCAGCAGCAGGATTTTCAAGAAGCGCAGCAGATAATTCTTGCAACTAGGGAGCAGCAACAGATGTTTAGAAACTATGAGCACCAAGTTTATGGTGGTTTTGAACCTGGAAATGGTGGATTTGGGAACCAAGCAGAATTGTTGTCGCCTTCTTTGGCTCATGGAAATTTTGGTAATGTTGGAGCTTACCAAATGCAGCAGCAAGGAGAACAACATCCCATTGAGGCACAGTTGCTCCTCTCGCCACAGCAGGGACAGCCCCATCAGCAACAACAGTGTGAAAGTGAGGATGGAAGGAATGTGCTTGATTTCTCAATCAAGTAG 822 0.5341 MSSMNSPCAACKLLRRKCTQECVFAPYFPPDNPQRFECVHRVFGASNVSKLLNELSVAQRDDAVKSLAYEAEARLRDPVYGCVGLISLLQQRLRQIQMELHSAKKEFSTYVSPQTMQILLANPGMVPPAEIVGPPPHQPMFNHGGNNMVPQQILVGHGGGQTVVRDPQQQDFQEAQQIILATREQQQMFRNYEHQVYGGFEPGNGGFGNQAELLSPSLAHGNFGNVGAYQMQQQGEQHPIEAQLLLSPQQGQPHQQQQCESEDGRNVLDFSIK* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03868 273 Coils Coil 86 106 - -
Phac3g03868 273 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Phac3g03868 273 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Phac3g03868 273 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 196 - -
Phac3g03868 273 MobiDBLite consensus disorder prediction 248 264 - -
Phac3g03868 273 MobiDBLite consensus disorder prediction 248 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03868 Phac-Chr3 38519292 38520912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03868 1 120 AS2 family AT5G66870 73.333 4.89e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phac3g03868 LOB 6.2e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03868 - - vum:124826574 375.941