Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03819 ATGGATGTGGACATAGTGAAGGCTTCCATGTGTGACACCACCAACATGGACGTGATGGCAATGATGATGCAAATGGAAAAGTTCCCCGAATTCTGCGACCCTTTTTATACCACCACCCCACCTTACACAGAAGCAGACATGTTGTCAAGTGGAAGCTCCTCAGCAAGCGTTTCCACCATTTTTAACAACGCAACTCCACCGCCTCTTGTTGATCCACCACCGCCAAATCTTCTAAATTTTTCCAACAATGACAACAACCTTATCCAACAACCTATGACACCTTCACCCCATCCCCCACAACCCAGCACGTTTCCCTACCCTTCTGAGAAAAAAAACTCCATGGCGGCGATGAGGGAAATGATATTCCGAATAGCGGTGATGCAACCTATTCACATAGACCCTGAATCCATAAAGCCACCGAAGCGAAGGAACGTGAAGATTTCAAAGGATCCGCAGAGCGTTGCGGCGAGGCACAGAAGGGAAAGGATAAGCGAGAAGATAAGGATTCTTCAGAGATTAGTTCCAGGTGGCACTAAGATGGACACGGCATCGATGCTGGACGAGGCCATTCACTACGTGAAGTTCTTGAAAAAACAGGGTTGCCAACCTTGTCAAGTGTTCGGTGGTTCTACTTCCAAACAATTGCTCAGCTAA 654 0.474 MDVDIVKASMCDTTNMDVMAMMMQMEKFPEFCDPFYTTTPPYTEADMLSSGSSSASVSTIFNNATPPPLVDPPPPNLLNFSNNDNNLIQQPMTPSPHPPQPSTFPYPSEKKNSMAAMREMIFRIAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQGCQPCQVFGGSTSKQLLS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03819 217 CDD bHLH_AtIND_like 148 199 - -
Phac3g03819 217 Gene3D - 142 203 IPR036638 GO:0046983
Phac3g03819 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Phac3g03819 217 Pfam Helix-loop-helix DNA-binding domain 156 196 IPR011598 GO:0046983
Phac3g03819 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 199 IPR036638 GO:0046983
Phac3g03819 217 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 58 199 IPR045843 GO:0003700|GO:0006355
Phac3g03819 217 SMART finulus 153 202 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03819 Phac-Chr3 38049389 38050374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03819 25 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 54.839 3.09e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g03819 HLH 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03819 - - gmx:100800816 257.299