Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03818 ATGGATTGGGTTCGAGGAGACGCAGTGGGTCAAGGAAGCTTCGCCACCGTTAGTTTAGTCATTCCGACTAACAATTCCTCTCAGTTTCCGTCTTTAACCGCCGTCAAGTCCTCCCAACCACTCACCTCGTGTTGGCTCAGAAACGAGAAACACGTGCTTGATCGCCTAGGTTCATGTTCAAGGATCATTCGCTGCTTTGGAGACGACTACAGTTTTGAGAATGGTGTTGAGTACTACAATTTGTTCCTTGAATACGCTGCCGCTGGGAGTCTCGCAGATGAGGTAAACAATTGCGGTGGCCAGATTCCCGAGCCTGAAGTTCGGCGTTACACGAGGTCCATCGTGGAAGGTTTGAATCACGTGCATCAAAACGGGTTTGTCCACTGCGACATAAAGCTGCAAAACATCCTCGTATTTGACGGCGGGGAAATCAAGATTGCGGATTTCGGTCTGGCGAAGGAGGCAGGGGAGAGAAAACAGAGGAAGAGTGAATGCAGGGGGACTCCGCTGTTTATGTCCCCGGAGCAAGTAATCAACGGAGAGTGTGAGTCGCCCGCAGACATATGGGCTCTGGGATGCGCCGTTGTGCAGATGGTGACCGGGAAGCCGGCGTGGAAGGTGGAGAAAGGGTCGAGTATGTGGTCGTTGATGCTTCGAATTGGGGTGGGAGAAGAAATTCCCGAGATACCTGAGAATTTGTCGAAAGAAGGGAAGGATTTTATCGAGAAGTGTTTTGTTAAGGATCCTAGAATGAGGTGGAGTGCAGAGATGCTTTTGAAGCACCCTTTTGTTTCTGATGACACTGTTTCATTTAAGCGCGTTCATGAATCGCCCAGAAGTCACTTCGATTTCCCCGACTGGGTTTCTAGTGCAACGTCTTCACTTCCCAGTTCGCCGGAATCTCAATCGCCGTGGAATTTTGACGAGTCCCGATTGGAAGGTTTCTGCTCGCCGGAGGACCGGCTCCGTCGGATATCGACGGTTAATCGACCGGCGAATTGGTCGGAATCAGATGGTTGGAGTAGTGTCAGGTGA 1035 0.5092 MDWVRGDAVGQGSFATVSLVIPTNNSSQFPSLTAVKSSQPLTSCWLRNEKHVLDRLGSCSRIIRCFGDDYSFENGVEYYNLFLEYAAAGSLADEVNNCGGQIPEPEVRRYTRSIVEGLNHVHQNGFVHCDIKLQNILVFDGGEIKIADFGLAKEAGERKQRKSECRGTPLFMSPEQVINGECESPADIWALGCAVVQMVTGKPAWKVEKGSSMWSLMLRIGVGEEIPEIPENLSKEGKDFIEKCFVKDPRMRWSAEMLLKHPFVSDDTVSFKRVHESPRSHFDFPDWVSSATSSLPSSPESQSPWNFDESRLEGFCSPEDRLRRISTVNRPANWSESDGWSSVR* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03818 344 SMART serkin_6 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03818 344 Pfam Protein kinase domain 6 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03818 344 SUPERFAMILY Protein kinase-like (PK-like) 3 304 IPR011009 -
Phac3g03818 344 ProSiteProfiles Protein kinase domain profile. 3 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phac3g03818 344 CDD STKc_MAPKKK 2 264 - -
Phac3g03818 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Phac3g03818 344 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Phac3g03818 344 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 293 - -
Phac3g03818 344 Gene3D Transferase(Phosphotransferase) domain 1 2 299 - -
Phac3g03818 344 FunFam Mitogen-activated protein kinase kinase kinase 17 2 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03818 Phac-Chr3 38024418 38026371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03818 1 344 MAP Kinase Kinase Kinase AT4G36950 52.571 7.42e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phac3g03818 Pkinase 6.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03818 - - gmx:100798607 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03818 3 38024418 38026371 Phac3g03818 3 38024418 38026371 ECH