Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03789 ATGGAACAAGGAGAAGGAGGAAGCACGAGGAGGAGAGGGAAAGAGGGTGAGACCACGCGCTACAAAGGAATCAGGATGAGGAAGTGGGGCAAGTGGGTCGCTGAGATTCGAGAACCCAACAAACGTTCGCGGATTTGGCTTGGTTCCTATTCCACGCCAGTCGCGGCAGCGCGTGCTTACGATACCGCCGTCTTCTATCTTCGGGGTCCCTCCGCCCGCCTCAATTTCCCCGACCTTCTCGCCGTCGAGGGCTCCGCACCCGCTGCCTCCGACATGTCCGCTGCCTCTATCAGGAAGAAGGCCACCGAGGTCGGCGCCAGAGTCGACGCGCTCCACCGCCAGCACCCGCATGCTTCCGCCGTCGGAGAATTTGCTGACCGGGTCGACCTCAATAAGACACCCGAACCCGAAAATTCGGATTGTGACTGGGACGGGGATTAG 441 0.6032 MEQGEGGSTRRRGKEGETTRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLAVEGSAPAASDMSAASIRKKATEVGARVDALHRQHPHASAVGEFADRVDLNKTPEPENSDCDWDGD* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03789 146 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Phac3g03789 146 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Phac3g03789 146 CDD AP2 19 79 IPR001471 GO:0003700|GO:0006355
Phac3g03789 146 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g03789 146 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Phac3g03789 146 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Phac3g03789 146 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Phac3g03789 146 FunFam Ethylene-responsive transcription factor 2 19 78 - -
Phac3g03789 146 MobiDBLite consensus disorder prediction 122 139 - -
Phac3g03789 146 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Phac3g03789 146 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 11 140 - -
Phac3g03789 146 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Phac3g03789 146 MobiDBLite consensus disorder prediction 122 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03789 Phac-Chr3 37757934 37759418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03789 21 144 AP2-EREBP Transcription Factor Family AT5G67190 56.442 1.22e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac3g03789 AP2 3.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03789 K09286 - gmx:100789373 238.424