Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03777 ATGGAAGACAAGATAGACATTGCAGACAAGAAGGTGTTGGTTGATATTGTAAAATTGGTTCAAAAGAGAGGCCTCAAGGGTAAGCTAGGAGACTGGAAGGAATTCTTGGACACTCATGACAAAAGGTTTGGGTCCAATTTGAGTGATCCATCAAAGCGACCCCATGAGTTATTGGCTACATTTCTAAAGTCTTTTTCGGAGGAGGAAGATTTGAAGTTTTTTGATAACATCATGCGACATCATGCAAACCAATACATGTTGGAGCGACTGAAAGATAAATCCCATGAGTCCCCGGAGCAGAGGCTAGTTCAAATAACTCTGCAGCATCCGTTATATCCATTGGACTATTCATTTCCATCAATTGATGAGGGGTGGATGGTTATAAATGTAAAAAACAAACCCAAGGTGATGAAGTCTACTACAATGCTTGCTGTTGATTGTGAAATGGTTCTTTGTGACGATGGGACAGAAGCGGTAGTTAAAGTCTGTGTGGTAGACCATAATTTAGAGGCCAAACTAAATGAATTTGTAAAACCTGACAAAAATATTGTGGACTACAGAACAGAGATCACTGGTGTCTGTTCTAAAGATCTAGAGGCTGTGACTTGCTCCTTGGCTGATATACAGAAATCCATGAAGAAGTTGTTATCAAAAGGAACCATATTAGTGGGTCACAGTTTGCATAATGATCTACGTGCGCTGAAGCTTGATCATGTCAGAGTCATTGATACTTCCTTTATCTTCCAATCCTTGGATGGATCTATGCACAGAAGACCTTCTTTGAATAGTTTATGTCAGGCTGTGTTGGGTTGTGGTGTTCGGGAAAAAGGTGCTCCACATAATTGTCTAGATGATGCATGTGCAGCTATGAAGCTTGTTCTTGCAAAGATCAAACATGGTGTTGATAGGGAATTTCCAATTTCATTGGCTCAAGAGCATGTTCCAGAATGTGATACATCAAAGCTTTTTCTTCACAAGATACCAACCACTGTAAACACTGAAGCACTGCATAACATTGTTCCTGGAGAATTCAGAACTGAACTGCAGCATTCCAAGAATGGTCAAGGAAGACATTATTCTGCCTTAGCTGTTTTTAAAAATCCACAAGAGGCTGATGAGGCCTATAAAAATGTCCAGGGAAGCCAATTAAAGGATACATATGGGCGTCCACAGAAACTTGTAACATTTCGGCTAAGTACAGGCATGACTGCCACTCTATTTGTTCGGAAAATGGTAAGTGATGAACCCAATGACCGGACTCAATCTAACAAGAGGGCTTTACAAACGGATGAGGCAGTTGATGTTTCCAAGAAAGCAAAGATAGATAAAAACATTGAAGAGGATGATGCCCCAAAGAAAGCAAAGATAGATAAAAACATTGAAGAGGATGATGCCCCAAGCAGTGATGCCCATTCAAATGAGATTGAAGCACTGAATCAACGATTAAAACAAAGTGAGTTGGAGATCGAATCGTTGAGGAAAGAGTTGACACAGAAAGATTTTGAAATATCCGCGCTGCATAAAATGGTAGCCTCTTTAAATAAGCGAAAAAATGTAGCCAAGAGATGA 1569 0.4003 MEDKIDIADKKVLVDIVKLVQKRGLKGKLGDWKEFLDTHDKRFGSNLSDPSKRPHELLATFLKSFSEEEDLKFFDNIMRHHANQYMLERLKDKSHESPEQRLVQITLQHPLYPLDYSFPSIDEGWMVINVKNKPKVMKSTTMLAVDCEMVLCDDGTEAVVKVCVVDHNLEAKLNEFVKPDKNIVDYRTEITGVCSKDLEAVTCSLADIQKSMKKLLSKGTILVGHSLHNDLRALKLDHVRVIDTSFIFQSLDGSMHRRPSLNSLCQAVLGCGVREKGAPHNCLDDACAAMKLVLAKIKHGVDREFPISLAQEHVPECDTSKLFLHKIPTTVNTEALHNIVPGEFRTELQHSKNGQGRHYSALAVFKNPQEADEAYKNVQGSQLKDTYGRPQKLVTFRLSTGMTATLFVRKMVSDEPNDRTQSNKRALQTDEAVDVSKKAKIDKNIEEDDAPKKAKIDKNIEEDDAPSSDAHSNEIEALNQRLKQSELEIESLRKELTQKDFEISALHKMVASLNKRKNVAKR* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03777 522 FunFam Small RNA degrading nuclease 3 137 311 - -
Phac3g03777 522 MobiDBLite consensus disorder prediction 414 470 - -
Phac3g03777 522 Coils Coil 468 502 - -
Phac3g03777 522 CDD REX1_like 143 294 IPR034922 -
Phac3g03777 522 MobiDBLite consensus disorder prediction 414 474 - -
Phac3g03777 522 SMART exoiiiendus 141 302 IPR013520 -
Phac3g03777 522 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 311 IPR047021 GO:0004527
Phac3g03777 522 SUPERFAMILY Ribonuclease H-like 142 298 IPR012337 -
Phac3g03777 522 Gene3D - 137 310 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03777 Phac-Chr3 37622326 37627817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03777 138 270 C2H2 Transcription Factor Family AT3G27970 27.517 1.10e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03777 K14570 - gmx:100785565 778.859