Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03771 ATGATGGCCGTAAGCCGAAAGGACATGGACCGGATCAAGGGTCCATGGAGCCCTGAAGAGGATGAGGCTTTGCAGAAACTGGTGGAGAGGCACGGGCCCAGAAACTGGTCGCTAATAAGCAGGTCAATCCCGGGCCGCTCTGGGAAATCCTGCAGGCTCCGGTGGTGCAACCAGCTGTCACCCCAGGTTGAGCACCGGGCTTTCACGCCCGAGGAGGACGACACGATAATCCGGGCTCATGCTCGCTTCGGTAACAAGTGGGCCACCATAGCCCGCCTTCTCTCGGGTCGCACCGATAACGCCATCAAAAACCACTGGAACTCAACCCTAAAGCGCAAGTGCGCCTCCATCATGAACGCAGAAGATCCCGCCGCTGCCGCTGCCGGTTACAGCCCGCAACCGCTCAAGCGCTCCGTCAGCGCCGGCGCAGCCCTTCCCCCGGGAAGCCCCTCAGGATCTGATGTGAGCGAGACCAGCGCCCCAGGCGTAGTCTCCCCATCGCACGTGTTCCGGCCCGTGCCGGTTCGACCTGTGGTCGAAACGGCGTCTTCGTGCGACGACGACGGCCCTACTACTTCACTGTCGCTGTCTCTTCCCGGGGTGGAGTCATCGGAAGCCTCGAATCGGGCGACGGCGATGCAAGCTAATCCCTTCGCGATAGGGCCGGTGACGAACGTTGCCATTCCGGCGGCGGAGGTTGGGATGGGAGCCTTGAATTTGAGTGCGGAGTTTATGGCGGTGATGCATGAGATGATAAAGAAGGAGGTTCGGAGTTACATGGAGCAGCAGAGTGGGATGTGTTTTCAGGGCGTGGACGGGTTTAGGAATGCGTCGGTGAAGCGAATTGGGATTAGCAGGGTTGATTCCTAA 870 0.6 MMAVSRKDMDRIKGPWSPEEDEALQKLVERHGPRNWSLISRSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASIMNAEDPAAAAAGYSPQPLKRSVSAGAALPPGSPSGSDVSETSAPGVVSPSHVFRPVPVRPVVETASSCDDDGPTTSLSLSLPGVESSEASNRATAMQANPFAIGPVTNVAIPAAEVGMGALNLSAEFMAVMHEMIKKEVRSYMEQQSGMCFQGVDGFRNASVKRIGISRVDS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03771 289 FunFam Transcription factor MYB44 67 113 - -
Phac3g03771 289 ProSiteProfiles Myb-like domain profile. 8 59 IPR001005 -
Phac3g03771 289 CDD SANT 15 57 IPR001005 -
Phac3g03771 289 SUPERFAMILY Homeodomain-like 10 106 IPR009057 -
Phac3g03771 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 63 IPR017930 -
Phac3g03771 289 MobiDBLite consensus disorder prediction 185 199 - -
Phac3g03771 289 Gene3D - 66 128 - -
Phac3g03771 289 ProSiteProfiles Myb-like domain profile. 60 110 IPR001005 -
Phac3g03771 289 MobiDBLite consensus disorder prediction 137 168 - -
Phac3g03771 289 CDD SANT 67 110 IPR001005 -
Phac3g03771 289 MobiDBLite consensus disorder prediction 180 199 - -
Phac3g03771 289 SMART sant 64 112 IPR001005 -
Phac3g03771 289 SMART sant 12 61 IPR001005 -
Phac3g03771 289 Gene3D - 12 64 - -
Phac3g03771 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 114 IPR017930 -
Phac3g03771 289 PANTHER MYB PROTEIN-RELATED 13 186 - -
Phac3g03771 289 FunFam MYB transcription factor 13 64 - -
Phac3g03771 289 Pfam Myb-like DNA-binding domain 16 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03771 Phac-Chr3 37534625 37536080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03771 5 288 MYB Transcription Factor Family AT4G37260 51.543 1.74e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g03771 Myb_DNA-bind_6 3.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03771 K09422 - gmx:100806145 441.425