Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03717 ATGACGCAATTCACACCCCAACTGCCTCCCTTCCACCAAATCACACCCCTCCCCAACCCTACCATGAACAAAAACCAAATCCCTAGGACTAGGCCCTGGCCTGCAGGCTTTCCTACCTCCAAGGCCTTAACCAACTTCGGAGACGCTAACTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATTCAAACAAACGACGTAACCCTCGCACAACAAATCCTTTGGGTCCTCAACAACATAGCCTCCCCCGACGGCGACTCCAATCAACGCCTTGCCTCCAGCTTCCTCCGCGCTCTCACCGCACGTGCTGCCCAAACCGGCACCTGCAAGATGCTCGTCGCTGTAGCCGATCACGCCCGCACCAACCTCTCCATAGACACCCACAAATTCTCCGTCATCGAGCTCGCCAACTTCGTCGACCTAACTCCCTGGCACCGCTTCGGCTTCACTGCCGCCAACGCTGCCGTCCTAGAAGCCACCGAGGGTTTCTCCGTCATCCACATCGTCGACCTGAGCCTCACGCATTGCATGCAGATTCCCACGCTCATCGACGCCATCGCCAGCCGCCACGAGGTCACTCCCCTCATTAAACTCACTGTTGCCGATGCCACCTGCAGAGACATCCCTCCTATGCTCGACCTCTCCTACGACGAACTCGGCGCCAAGTTGATCAATTTCGCAAGGTCCAGAAACGTCGTCATGGAATTCAGAGTGGTTTCTTCCACTTACCAAGACGGCTTCGCGGGTTTGATCGAACAGTTAAGAGTGCAACAACAACATTTTGTTTACGCAGCAGAACCTCGCTCCTGTGAGGCTTTGGTTATCAACTGTCACATGATGCTTCACTACATCCCCGACGAATCCCTACACGCAATTCCTGAAACTGACTTAGCCTCTTTGCTCTACGATTCTGCTGCTTCTTCTGCTGCTGCTTCTTCTGCTGTTAGTGTTACTTCCACTTCCTCGCTGCGATCCTTGTTCCTTAAATCCCTGCGGGGTTTGGATCCAACTGTTGTAATCTTGGTAGATGAAGATGCGGATTTGACATCCAATAACTTGGTTTGCAGGCTAAGATCTGCGTTTAACTATCTATGGATACCTTACGACACTGTGGACACGTTCCTTCCACGAGGGAGCAAGCAAAGACAGTGGTACGAAGCAGACATTTGCTGGAAGATTGAGAACGTGATAGCGCACGAAGGGATTGAGAGGGTGGAGAGGGTTGAGCCTAAGAGTAGGTGGGAGCAAAGAATGAAGAACGCGAACTTTCAAGGGGTGGCTTTCAGTGATGACTCTGTTGCGGAGGTGAAGGGCATGCTGGATGAGCATGCTGCGGGGTGGGGATTGAAGAGGGAAGATGAACACATTCTCCTCACTTGGAAAGGACACAACGTCGTCTTTGCCTCTGCTTGGTTACCTGCTTGA 1428 0.5259 MTQFTPQLPPFHQITPLPNPTMNKNQIPRTRPWPAGFPTSKALTNFGDANCMEQLLVHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAQTGTCKMLVAVADHARTNLSIDTHKFSVIELANFVDLTPWHRFGFTAANAAVLEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVTPLIKLTVADATCRDIPPMLDLSYDELGAKLINFARSRNVVMEFRVVSSTYQDGFAGLIEQLRVQQQHFVYAAEPRSCEALVINCHMMLHYIPDESLHAIPETDLASLLYDSAASSAAASSAVSVTSTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGIERVERVEPKSRWEQRMKNANFQGVAFSDDSVAEVKGMLDEHAAGWGLKREDEHILLTWKGHNVVFASAWLPA* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03717 475 Pfam GRAS domain family 52 472 IPR005202 -
Phac3g03717 475 ProSiteProfiles GRAS family profile. 43 473 IPR005202 -
Phac3g03717 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 51 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03717 Phac-Chr3 37078872 37081082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03717 34 474 GRAS Transcription Factor Family AT3G49950 56.404 3.90e-175 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phac3g03717 GRAS 2.4e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03717 - - gmx:100814364 771.926