Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03675 ATGTCTCTCGACTCCACAAGCCACCAAACTCCTGACTTGTATTGCAGTGAAGTAACTAGCGAAGTGATTCACTTGGAGGATTCCGATGAGGCGTTGAAGTTGAATTGTGTTCTATGGGGAGACTCCGATAGTGATGAAAGTTGTCTATTGAGCTTATTAGAATCTGAAAATGACCAAGTACAGGAACAAACAAAATCCCCAGGACAACTTCGCAAAACATGGCTGGTTAGTCCTCGAGAAGAGGCCATAAATTGGATCCTAAAGGTGCATGCTTACTACAGTTTTAGACCCGAGACAGCTTATCTTTCTGTAAATTACCTCGATCGTTTCCTCTTGTCACACACCTTGAGGCATGATAAAGCATGGCCTCTGCAGCTGTTATCAGTTGCTTGTCTTTCACTAGCAGCTAAAATGGAAGAAACCAAAGTGCCACTTCTTTTGGACCTACAAGTGATCGAGTCTACGTTCCTCTTTAAGCCCAAAACAGTTCAAAGGATGGAACTTTTGGTTATGACCAGTCTCAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTTGTCCATCTTTTCATTGCCAAGCTTTCATGCTCTGCTTCCACCTGGGGGGATTTAAGTTACACTGTTTCTCGTGTCTCAGATGTTATTATCAGAACATGTCTAGTCATGGATTTCTTGGTGTTTTCACCATCTACAATAGCAGCATCTGCTCTGTTATGGGTAACCAATCAATGCGTAGAAGACACGAAATCAGATTGCTTCCACAAGAATATAAACATTGAGATGGTTCGGAAATGTTACAAACTAATGAAGCAGAAACAGATCATTCGCTTATCAGAACTTTATTGGGCAAGGAGTTCGCAATTATTGCCCCGAAGTCCCACCTGTGTGCTTGATAGTGCAACTATGCAAGAAAGCTGCGATGCTTACAAGCCCTGA 936 0.4252 MSLDSTSHQTPDLYCSEVTSEVIHLEDSDEALKLNCVLWGDSDSDESCLLSLLESENDQVQEQTKSPGQLRKTWLVSPREEAINWILKVHAYYSFRPETAYLSVNYLDRFLLSHTLRHDKAWPLQLLSVACLSLAAKMEETKVPLLLDLQVIESTFLFKPKTVQRMELLVMTSLKWRLRTITPFDFVHLFIAKLSCSASTWGDLSYTVSRVSDVIIRTCLVMDFLVFSPSTIAASALLWVTNQCVEDTKSDCFHKNINIEMVRKCYKLMKQKQIIRLSELYWARSSQLLPRSPTCVLDSATMQESCDAYKP* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03675 311 CDD CYCLIN_AtCycD-like_rpt1 79 176 - -
Phac3g03675 311 FunFam D6-type cyclin 176 267 - -
Phac3g03675 311 SUPERFAMILY Cyclin-like 45 178 IPR036915 -
Phac3g03675 311 PANTHER CYCLINS 51 271 IPR039361 -
Phac3g03675 311 CDD CYCLIN_AtCycD-like_rpt2 181 269 - -
Phac3g03675 311 Gene3D - 62 179 - -
Phac3g03675 311 Gene3D - 52 266 - -
Phac3g03675 311 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Phac3g03675 311 SMART cyclin_7 84 172 IPR013763 -
Phac3g03675 311 SMART cyclin_7 185 271 IPR013763 -
Phac3g03675 311 Pfam Cyclin, N-terminal domain 54 178 IPR006671 -
Phac3g03675 311 FunFam D6-type cyclin 66 175 - -
Phac3g03675 311 SUPERFAMILY Cyclin-like 163 276 IPR036915 -
Phac3g03675 311 SMART Cyclin_C_2 181 305 IPR004367 -
Phac3g03675 311 Pfam Cyclin, C-terminal domain 181 271 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03675 Phac-Chr3 36757783 36759721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03675 76 274 Core Cell Cycle Gene Families AT1G70210 45.631 2.08e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03675 K18810 - gmx:100799323 481.485