Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03646 ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAACGTGAAGAGAGGTCCATGGTCTCCTGAAGAAGACGCCAAACTCAAATCTTACATCGAAGACCACGGCACAGGTGGCAACTGGATAGCTTTGCCCCAGAAAATAGGTCTGAAAAGGTGCGGCAAAAGTTGTCGTCTCAGATGGCTGAACTATCTTCGCCCAAACATCAAACATGGGGGTTTCTCAGAAGAAGAAGACAACATAATTTGCAGCCTCTATGTTAACATTGGAAGCAGGTGGTCAATTATAGCAGCGCAATTACCAGGGCGCACGGATAATGACATAAAGAACTATTGGAACACTAAGCTGAAGAAGAAGCTACTGGGGAAGCAAAGGAAGGAGCAACACGCTCAAGCTCGAAGAGTTGGTGGCCTAAAGCAAGAGATCAAGAGGGAGAGTGAAGATTTGATGTTACCTGTGGGAGTTATTAGCCGAACTCCTTATTGGCCACATGAACAGAATTCTTGGCCCATTCCAGTGGCAAATGCTTGCCTCCAATACTATGATCTCAACAACAAAACATCATCCGTCATACACATCCCTGACAACACAGTCACTGCCAACATGAACTCACAATACTCATCATTTGACGTTTCCTTAACACAAGACCAGCTATATCCCTCCACAGTTAACATGATCACCACAGACACATGTCACACATCGAATGTGTTTCAAGGGTTTGGGAACTTCTCCACTGATTTGGCCTGTGTCAACTCGCAACAAATCGATGGATCAGAACTGGTTTTTTATGGAATGGAGTCAATGGAAATTGCCAATGGTAGCACAAACACGAATTCAACAGAAAGCACAAGTTGGGGAGATATAAGCTCTATGGTTTACCCGCCTTTGGTTTCTCACTACGAAGCTTGCCAACAGAGAATAATGCCTCAAAATTTTACTTTCGAGGAGTCAAGTTACTTCGCAATGCGAACGCAATAA 969 0.4458 MGRAPCCDKANVKRGPWSPEEDAKLKSYIEDHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGKQRKEQHAQARRVGGLKQEIKRESEDLMLPVGVISRTPYWPHEQNSWPIPVANACLQYYDLNNKTSSVIHIPDNTVTANMNSQYSSFDVSLTQDQLYPSTVNMITTDTCHTSNVFQGFGNFSTDLACVNSQQIDGSELVFYGMESMEIANGSTNTNSTESTSWGDISSMVYPPLVSHYEACQQRIMPQNFTFEESSYFAMRTQ* 323
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03646 322 PANTHER OS09G0431300 PROTEIN 1 280 - -
Phac3g03646 322 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phac3g03646 322 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Phac3g03646 322 CDD SANT 71 111 IPR001005 -
Phac3g03646 322 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Phac3g03646 322 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Phac3g03646 322 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phac3g03646 322 FunFam Transcription factor RAX3 7 68 - -
Phac3g03646 322 Gene3D - 7 68 - -
Phac3g03646 322 CDD SANT 16 62 IPR001005 -
Phac3g03646 322 Gene3D - 70 142 - -
Phac3g03646 322 FunFam Transcription factor RAX3 70 145 - -
Phac3g03646 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Phac3g03646 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phac3g03646 322 SMART sant 13 64 IPR001005 -
Phac3g03646 322 SMART sant 67 115 IPR001005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phac3g03646 Phac-Chr3 36506451 36508101 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03646 1 290 MYB Transcription Factor Family AT3G49690 49.379 3.39e-87 262
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g03646 Myb_DNA-binding 7.4e-14 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03646 K09422 - gmx:100791406 496.893