Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03629 ATGATGGGTCTTCATCAGGATCCCAGCGACTCAGGCCTTCAGCTTATTCTAGGATTGGCTTTGACTGCCACCCCAGAAGACACCATCACTCCGTCACCACCATCCATTTCCAACAACCTTCATCATCATCATCATCATCTTACAACTCTTAGGCCAAACTCCTATTCCTCCAAATCCAGTTTCATCTCTACAAGTAACTCCGAGCCTGAACCATCACTAACGTTGGGCCTGTCCCGCGAGACTTACCGGCAGCAGGTGGTGAAACTTCCCAGAAACATAGGACACAACAAAGTCTCCTCTGAGGACCCTCTTGAACAGACTTCACCTCACAGTGCTATCTCCTCCTTCTCCAGTGGAAGGGTCAAGAGGGAGAGGGATCTTAGCTGTGAAGAAGTGGATGCAACAGAGACAGAGAGGGTTTCTTCAAGAGCCAGCGACGAAGAAGAGGACGGCACCACCGCCAGGAAGAAACTCAGGCTTACCAAAGAACAATCCGCTTTGCTTGAAGAAAGCTTCAAACAACACAGCACCCTCAATCCTAAACAGAAGCAAGCTTTGGCCAAGCAGTTAAGCCTTCGGCCTCGACAAGTGGAAGTGTGGTTCCAGAACCGGAGAGCCAGAACAAAGCTGAAGCAGACAGAGGTGGACTGCGAGTTCCTAAAAAAGTGTTGTGAAACATTAACAGACGAGAACAGAAGGTTGCAGAAGGAGCTGCAAGAGCTGAAGGCACTGAAACTGGCTCAGCCCTTGTACATGCCTATGTCTGCGGCAACCCTCACCATGTGTCCCGCCTGTGAAAGGCTCGGTGGCGGCGTCGGCGGTGGCGCTTCCGCTAAGTCACCCTTCTCAATGGCTCCTAAACCGCACTTCTTCAACCCCTTCGCCAATCCTTCTGCAGCATGTTGA 906 0.5121 MMGLHQDPSDSGLQLILGLALTATPEDTITPSPPSISNNLHHHHHHLTTLRPNSYSSKSSFISTSNSEPEPSLTLGLSRETYRQQVVKLPRNIGHNKVSSEDPLEQTSPHSAISSFSSGRVKRERDLSCEEVDATETERVSSRASDEEEDGTTARKKLRLTKEQSALLEESFKQHSTLNPKQKQALAKQLSLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELKALKLAQPLYMPMSAATLTMCPACERLGGGVGGGASAKSPFSMAPKPHFFNPFANPSAAC* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03629 301 SMART HOX_1 153 215 IPR001356 GO:0003677
Phac3g03629 301 Gene3D - 159 209 - -
Phac3g03629 301 MobiDBLite consensus disorder prediction 90 156 - -
Phac3g03629 301 FunFam Homeobox-leucine zipper protein 18 136 216 - -
Phac3g03629 301 ProSitePatterns 'Homeobox' domain signature. 186 209 IPR017970 GO:0000981|GO:0006355
Phac3g03629 301 Pfam Homeobox associated leucine zipper 211 245 IPR003106 GO:0006355|GO:0043565
Phac3g03629 301 MobiDBLite consensus disorder prediction 119 156 - -
Phac3g03629 301 SMART halz 211 254 IPR003106 GO:0006355|GO:0043565
Phac3g03629 301 MobiDBLite consensus disorder prediction 50 73 - -
Phac3g03629 301 SUPERFAMILY Homeodomain-like 145 212 IPR009057 -
Phac3g03629 301 MobiDBLite consensus disorder prediction 99 118 - -
Phac3g03629 301 Coils Coil 217 247 - -
Phac3g03629 301 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 58 275 - -
Phac3g03629 301 MobiDBLite consensus disorder prediction 26 73 - -
Phac3g03629 301 ProSiteProfiles 'Homeobox' domain profile. 151 211 IPR001356 GO:0003677
Phac3g03629 301 Pfam Homeodomain 155 209 IPR001356 GO:0003677
Phac3g03629 301 CDD homeodomain 155 212 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03629 Phac-Chr3 36462004 36463978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03629 2 301 Homeobox Transcription Factor Family AT4G37790 57.188 7.17e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Phac3g03629 Homeodomain 2.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03629 K09338 - gmx:100807123 397.897