Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03618 ATGACACAAATCTCATCGACCATCTACTTGCCTGAATTTGGAATGGAGGACCCCACTTTGTTTCATCAATACCCGATGGATTCCTTTCCATTCCAGCTCGATGATTTTGACTTTGAGTCCTTCTCCGCGTCCCCAAAGGGTTCTTCCTCTCACAAGCGCTTGAGCTCCGAAAGCACACAAAACTCTTCCCTCACTCAAAGTGCTGAAACTTCTGTTGCCCCACCTAGACCAACCAAGCAACCCAAGACTACTATGAGTACCTGGAGTGCTTACGGCACTGACATGATGGCTCCCAAGGCTGCTTCCTCTTCATCCTCTAAAATCATCTCCTTTGACAAATCTAATGCTTCTTCTGTTTCTTCCCAACAATTCTACAAACTCGATGCTGCAAAACTACTGAAGAAGCCTAAAATTGAAATTGGGTATGGTGAGAGCCTGGATTTTGCAGCTGTGGCTTCTCAAAGTTCCTATGACAATGATAGTTTTCTAGGCTATGATAAGGAAGAGAAAAAGGCCGCAGCCACAATGGCTAGAAACCCAACCCAAGCTCAAGATCACGTCATAGCCGAAAGAAAACGAAGGGAAAAGCTCAGCCAGAGGTTCATTGCTCTTTCGGCCTTAGTTCCTGGACTCAAGAAGATGGACAAGGCTACCGTCCTAGAAGATGCTATAAAGTACGTGAAACAACTACAAGAACGGGTAAAGATTCTGGAGGAGCAAACTGTGGATAAAACAGTTGAATCTGCAGTGTTCGTGAAGAGATCAGTTGTCTTCACCAGAGATGATAGCTCCTACTCCGGTGAAAACTCCAACCAGTCACTCCCCGAAATCGAAGCAAGAATTTCTGGTAAAGAGGTACTCGTCAGGCTCCACTGCGACAAACACAGTGGACGAGCAGCTGCTATACTAAGGGAATTAGAGAAGCATAATCTCACAGTTCAGAGTAGCAGCTTTTTGCCCTTTGGGAATAACACTCTTGACATAACTATTGTTGCTAAGATGGACAAGGACTACTGCTTGACTGCAAAAGATCTCATAAGAAACTTAAGTCAGTGTTTGAGGCAGCTTTCATAG 1074 0.4479 MTQISSTIYLPEFGMEDPTLFHQYPMDSFPFQLDDFDFESFSASPKGSSSHKRLSSESTQNSSLTQSAETSVAPPRPTKQPKTTMSTWSAYGTDMMAPKAASSSSSKIISFDKSNASSVSSQQFYKLDAAKLLKKPKIEIGYGESLDFAAVASQSSYDNDSFLGYDKEEKKAAATMARNPTQAQDHVIAERKRREKLSQRFIALSALVPGLKKMDKATVLEDAIKYVKQLQERVKILEEQTVDKTVESAVFVKRSVVFTRDDSSYSGENSNQSLPEIEARISGKEVLVRLHCDKHSGRAAAILRELEKHNLTVQSSSFLPFGNNTLDITIVAKMDKDYCLTAKDLIRNLSQCLRQLS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03618 357 CDD bHLH_AtNAI1_like 183 255 - -
Phac3g03618 357 SMART finulus 187 236 IPR011598 GO:0046983
Phac3g03618 357 PANTHER BHLH TRANSCRIPTION FACTOR 24 354 - -
Phac3g03618 357 Gene3D - 172 245 IPR036638 GO:0046983
Phac3g03618 357 MobiDBLite consensus disorder prediction 42 86 - -
Phac3g03618 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 241 IPR036638 GO:0046983
Phac3g03618 357 Coils Coil 220 247 - -
Phac3g03618 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 181 230 IPR011598 GO:0046983
Phac3g03618 357 Pfam Helix-loop-helix DNA-binding domain 184 231 IPR011598 GO:0046983
Phac3g03618 357 FunFam Basic helix-loop-helix family protein 178 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03618 Phac-Chr3 36298281 36300861 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03618 165 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 50.000 6.00e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g03618 HLH 7.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03618 - - gmx:100798011 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03618 3 36298281 36300861 Phac3g03618 3 36298281 36300861 ECH
Phac2g00762 2 4660619 4663057 Phac3g03618 3 36298281 36300861 PCT