Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03615 ATGACCTCAATGGAGGAATCATGGACTAGTTGGCTCTGTGATATGGAACCAGATGATTACAGTTTCATCAGTCAATCAGACATAAAGGTGGAGGATATGATTGGAAGTTTAGCATCTCCTCGTGATATAGCCATTGCTTTAGAAGAGAACCCCCAGAGTTCATTTTCCCAGGAGAGTCACTCTTCAGTCACTGAGAGCGGCATAGAAGAGAGGCCTTTGAAGTTACTCAAGACATGCACTTCAAACTCTGCCAAAACAGACCAACTCTCACAAAAGAAAGCTTCCGCACCCTGCTCCTATATTCTTTCCTTTGACAACACAAATCCACCAACATCAAAGGTTGAATCGCCTGTAAAGCCAGAAACCAAGGTTAATCGTGGGATAGCTCTGCCTTCAAAGAATGAACCAAAACGTGTTACTCAGGAGAGCAAGAAGACGGGCTCATCAGCCAGATCTTCTCATCACACACAAGATCACATAATCGCCGAGAGAATGAGGAGAGAAAAAATTAGCCAGCAGTTCATAGCCCTCTCAGCCCTTATTCCAGACCTCAAAAAGATGGACAAGGTATCTGTATTGGGGGAAGCCATAAGGTACGTGAAGGAGCTGAAGGAAAAAGTAAAAGTGATGGAGGAGCAGGGCAAAAGGAAAAGCCAGGAACCGGTGATGCGAGGGAAGAAATCTCAGGTTTGTGCTGCTGCGGACGAGGATGTCTCAGACACTTCGTCAAATTCCTGTGAGTTCGGAAATTCTGATGACCCCTCATCCAAAACAAATCTGTCACTGCCAGAAGTAGAAGCAAGGGTGTCAAAGAAGAACGTGCTGATTCGAATCCTCTGCGAGAAAGAAAAGGTAGTGCTGGTGAACATTTTTAGAGAGATAGAGAAACTTCATCTCTCAGTCATCAATAGCAGCGCCTTATCTTTCGGTTCCTCTGTTCTCGACACAACCATCGTAGCCGAGATGGAGGATGAATTCAAGATGAGCGTGAAGGAACTGGCTGGAAATCTGAGAGTAGGACTGATGCAGTTTATGTAG 1038 0.4518 MTSMEESWTSWLCDMEPDDYSFISQSDIKVEDMIGSLASPRDIAIALEENPQSSFSQESHSSVTESGIEERPLKLLKTCTSNSAKTDQLSQKKASAPCSYILSFDNTNPPTSKVESPVKPETKVNRGIALPSKNEPKRVTQESKKTGSSARSSHHTQDHIIAERMRREKISQQFIALSALIPDLKKMDKVSVLGEAIRYVKELKEKVKVMEEQGKRKSQEPVMRGKKSQVCAAADEDVSDTSSNSCEFGNSDDPSSKTNLSLPEVEARVSKKNVLIRILCEKEKVVLVNIFREIEKLHLSVINSSALSFGSSVLDTTIVAEMEDEFKMSVKELAGNLRVGLMQFM* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03615 345 Coils Coil 193 220 - -
Phac3g03615 345 PANTHER BHLH TRANSCRIPTION FACTOR 51 344 - -
Phac3g03615 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Phac3g03615 345 MobiDBLite consensus disorder prediction 235 259 - -
Phac3g03615 345 MobiDBLite consensus disorder prediction 49 63 - -
Phac3g03615 345 MobiDBLite consensus disorder prediction 137 158 - -
Phac3g03615 345 Gene3D - 145 220 IPR036638 GO:0046983
Phac3g03615 345 Pfam Helix-loop-helix DNA-binding domain 158 203 IPR011598 GO:0046983
Phac3g03615 345 MobiDBLite consensus disorder prediction 234 259 - -
Phac3g03615 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 157 220 IPR036638 GO:0046983
Phac3g03615 345 SMART finulus 160 209 IPR011598 GO:0046983
Phac3g03615 345 MobiDBLite consensus disorder prediction 48 69 - -
Phac3g03615 345 MobiDBLite consensus disorder prediction 109 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03615 Phac-Chr3 36269670 36271748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03615 9 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.311 2.82e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g03615 HLH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03615 - - gmx:100787596 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03615 3 36269670 36271748 Phac3g03615 3 36269670 36271748 ECH