Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03614 ATGAAAAATGCACAAATGGATGGTTACAAATTCTTTAACACACTTTGTGTTGCTTTCTTTTGTTTTTGTTTTTGGTGTCAGGACATGGATGATTACAATTTGTTTCCAGATGAGAGTGCCATGAACTTGAACTTGTTTGATGACCAAGAGTTTCTACCACAAGACATTGTGAATGCCCTTGAAGAACAGACACAGACCCTGCAGCAATCTCTGTCTTCGGAGTGCCCTTCCAAAACTGTGAGCAACTCCTCCACCGATGATGCCAGTTTTGACTTTGAGAGACCAGCCAAGTTACTGAAAACGACAAGCAGTAGTTGCTGTAACTCTGACTCATCCACCATCACCAATAACCTCTCACCGAAACTTTCCCCATCCACATCCTTCTCCTCCTTTCAGTCTCAGATTCTCTCTTTTGACAACTCCAACTCCTCCCCTCCCAACAACACCACCCAGTTTTACGGCTTTGACTTAAACCCAACTCAGAACGAAATGGTGTCAGTGTCAGTGCCCCAACCGACAAAATCACGGTTCCCTAATCAAACTCCAAAATGGTCCTCAAAAAATCAGAACTTTGAAACAAAACCCTCATCACATGGCAAGAGATCTCCTGCTCACGCTCAGGATCACATCATGGCCGAGAGAAAACGAAGAGAGAAGCTCAGCCAGAGCTTCATTGCTCTTGCAGCTCTTGTTCCTGGCCTAAAGAAGATGGATAAGGCTTCCGTGTTAGGGGACGCTATCAAATATGTGAAAGATCTTAAAGAGCGTTTGGCAGTGCTTGAAGAGCAGAGCAAGAAAACAAGGGGAGAATCGGTGGTGGTCCTGAACAAGCCAGACCTCTCAGGCGATGATGACTCTTCTTCATGTGATGAGAGCATTGATGCTGATAGTGTCAGTGACTCACTGTTTGAACTGGAATCGAGAGTGTCAGGGAAGGAGATGCTGCTTCGGATCCACTGCCGGAAGCAAAAGGGTCTTCTCGTCAAATTACTAGCGGAGATTCAAAGAAATAACCTCTTCGTTATTAACAGCAGTATCTTACCATTCGGTGATTCTATCCTTGACATTACCGTAGTTGCTCAGATGGGAGAAAATTACAATTTGACCACGAAGGGACTTGTGAAGAACCTACGCGTGGCGGCATATAAGATTATGTCATAA 1161 0.4462 MKNAQMDGYKFFNTLCVAFFCFCFWCQDMDDYNLFPDESAMNLNLFDDQEFLPQDIVNALEEQTQTLQQSLSSECPSKTVSNSSTDDASFDFERPAKLLKTTSSSCCNSDSSTITNNLSPKLSPSTSFSSFQSQILSFDNSNSSPPNNTTQFYGFDLNPTQNEMVSVSVPQPTKSRFPNQTPKWSSKNQNFETKPSSHGKRSPAHAQDHIMAERKRREKLSQSFIALAALVPGLKKMDKASVLGDAIKYVKDLKERLAVLEEQSKKTRGESVVVLNKPDLSGDDDSSSCDESIDADSVSDSLFELESRVSGKEMLLRIHCRKQKGLLVKLLAEIQRNNLFVINSSILPFGDSILDITVVAQMGENYNLTTKGLVKNLRVAAYKIMS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03614 386 Gene3D - 197 270 IPR036638 GO:0046983
Phac3g03614 386 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 270 IPR036638 GO:0046983
Phac3g03614 386 MobiDBLite consensus disorder prediction 171 215 - -
Phac3g03614 386 Coils Coil 243 270 - -
Phac3g03614 386 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 204 253 IPR011598 GO:0046983
Phac3g03614 386 Pfam Helix-loop-helix DNA-binding domain 208 253 IPR011598 GO:0046983
Phac3g03614 386 SMART finulus 210 259 IPR011598 GO:0046983
Phac3g03614 386 MobiDBLite consensus disorder prediction 198 215 - -
Phac3g03614 386 PANTHER BHLH TRANSCRIPTION FACTOR 63 382 - -
Phac3g03614 386 CDD bHLH_AtNAI1_like 205 277 - -
Phac3g03614 386 MobiDBLite consensus disorder prediction 171 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03614 Phac-Chr3 36239704 36242213 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03614 83 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.850 3.13e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phac3g03614 HLH 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03614 - - var:108333272 554.673