Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03607 ATGGCTGGTTTGGATTTAGGAAGCGCTTCACGCTTTGTTCAAAACCTTCACAGACCGGACTTGCACTTGCAGCAGCTCCATCGCGATTCGGAGGACCAAGAGACGCCGCCGCCGAACCGCGGAACCTTGCCGTTCGAAGACGATGACCGAAGCCAAGGATTGGAGCTAGTTTCAGCGGGTCCCGGTGACGTGGTCGGTCGGCGTCCACGTGGCAGGCCGCCGGGATCCAAGAACAGGCCGAAGCCGCCGGTGATAATCACGCGGGAGAGCGCCAACACGCTCCGCGCGCATATCCTCGAGGTCGGAAGCGGCTCCGACGTCTTCGACTGCGTCACCACCTACGCGCGCCGCCGCCAGCGTGGGATCTGCATCCTCAGCGGCAGCGGCACCGTCACTAATGTCAGCCTCCGCCAGCCCGCTGCTGCAGGCGCCGTCGTAACGCTCCACGGCCGCTTCGAGATACTTTCCCTCTCCGGCTCCTTCCTCCCGCCGCCGGCTCCGCCTGGGGCGACCAGTCTGACTATCTACCTCGCCGGAGGGCAGGGCCAGGTCGTGGGAGGAAACGTGGTTGGAGAGCTGACCGCAGCGGGGCCGGTGATCGTCATCGCCGCGTCGTTCACGAACGTAGCCTACGAGAGGCTACCGTTAGAAGAAGAAGAACAGCTTCAGATTCAGCCACCTGCTACGACGTCGTCTCATGGCGTTGGAAATAACAACAGCAACAATAACAATAACAACTCTTTCCCCGACCCTTCTTCGGGACTTCCCTTCTTCAACTTACCTCTGAATATGCAGAACGTTCAGTTACCCGGGGAGGGTTGGGCGGGAAACGCTGCTTCACGTCCACCACCTTTTTGA 858 0.6084 MAGLDLGSASRFVQNLHRPDLHLQQLHRDSEDQETPPPNRGTLPFEDDDRSQGLELVSAGPGDVVGRRPRGRPPGSKNRPKPPVIITRESANTLRAHILEVGSGSDVFDCVTTYARRRQRGICILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQLQIQPPATTSSHGVGNNNSNNNNNNSFPDPSSGLPFFNLPLNMQNVQLPGEGWAGNAASRPPPF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03607 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 226 - -
Phac3g03607 285 PIRSF ESCAROLA 7 284 IPR014476 GO:0003680
Phac3g03607 285 CDD DUF296 95 178 IPR005175 -
Phac3g03607 285 MobiDBLite consensus disorder prediction 27 84 - -
Phac3g03607 285 Gene3D - 94 230 - -
Phac3g03607 285 ProSiteProfiles PPC domain profile profile. 91 227 IPR005175 -
Phac3g03607 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 36 260 IPR014476 GO:0003680
Phac3g03607 285 MobiDBLite consensus disorder prediction 223 254 - -
Phac3g03607 285 MobiDBLite consensus disorder prediction 220 254 - -
Phac3g03607 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 208 IPR005175 -
Phac3g03607 285 FunFam AT-hook motif nuclear-localized protein 94 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03607 Phac-Chr3 36140080 36141934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03607 1 283 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 67.213 6.92e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03607 - - pvu:PHAVU_003G230600g 494.967