Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03606 ATGGATGCTCGAGAACCGCCCCGCCCACCGCCACCCTCCATCATGGCAGGCCCCACCTCCTATGCCCACACCAACATCGGCCCTAATTCGTCCGGCGCCGTCATGATGGCGCCAGCCACCGCGCGATTTCCCTTCGGCGTCGGCGTCGTGCCGCAGCAGCAGCAACAGCCTCCGCCAGCGTCGGAGCCTTTCCCCGTCTCCCCTGCTGCCGCCTACGACGGCTCCTCCTCGCCGATGAAGCCATGTTCGCTCGCCAAGAAGAAGCGCGGTCGTCCCCGGAAGTACTCGCCGGACGGTAACATTGCCCTCGGCCTCGCTCCTACCCATGCCTCACCTCCTCCACCTCCCTCTACCGCCGCTTCCGGCGGCGGTATCGGTGGAGATTCGGCCGGTACTGCCTCCGCCGATGCTCCGGCGAAGAAGCACCGAGGAAGGCCTCCCGGTTCTGGAAAGAAACAGCTGGATGCTCTCGGAGCTGGTGGGGTTGGATTCACTCCCCACGTGATCTTGGTGGAGTCTGGCGAGGACATCACCGCAAAAATTATGGCCTTTTCTCAGCAAGGGCCTCGGACAGTTTGTATTCTCTCAGCTATTGGTGCAATCTGTAATGTTACCCTTCGACAACCTGCACTGTCTGGTGGTACTGCTACATACGAGGGCCGATTTGAGATTATATCATTATCAGGTGCCATGCAACAATCTGAAAGTAACGGTGAACGTAGCAGAACATGCACTTTGAATGTAACCCTTGCAGGGTCGGATGGACGTGTTTTGGGTGGTGGAGTTGCTGGAACGCTAACTGCGGCATCAACTGTACAGGTCATAGTGGGTAGCTTTATTGTGGATGGAAAAAAGTCGAGCTCGAATGTCCTAAAATCTGGGCCTTCTTCTGCACCACTCCCCCAAATGCTAACCTTTGGTGCACCCATGACTCCAACTAGTCCTACTTCTCAAGGGCCTTCAACTGAGTCCTCTGAGGAACATGACCACACTCCTTTTTGTCGGGGGCCTGGGCCTGGGTCTGGGTCTGGGCCTGGACCTGGACTCTACAATAATTCTAGTCAGCCCGTGCATAATATGCCCATGTACCATCATCCACTATGGGCTGGCCAAAGTCATCAGTGA 1125 0.5698 MDAREPPRPPPPSIMAGPTSYAHTNIGPNSSGAVMMAPATARFPFGVGVVPQQQQQPPPASEPFPVSPAAAYDGSSSPMKPCSLAKKKRGRPRKYSPDGNIALGLAPTHASPPPPPSTAASGGGIGGDSAGTASADAPAKKHRGRPPGSGKKQLDALGAGGVGFTPHVILVESGEDITAKIMAFSQQGPRTVCILSAIGAICNVTLRQPALSGGTATYEGRFEIISLSGAMQQSESNGERSRTCTLNVTLAGSDGRVLGGGVAGTLTAASTVQVIVGSFIVDGKKSSSNVLKSGPSSAPLPQMLTFGAPMTPTSPTSQGPSTESSEEHDHTPFCRGPGPGSGSGPGPGLYNNSSQPVHNMPMYHHPLWAGQSHQ* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03606 374 CDD DUF296 165 279 IPR005175 -
Phac3g03606 374 Pfam Plants and Prokaryotes Conserved (PCC) domain 166 279 IPR005175 -
Phac3g03606 374 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 52 328 IPR039605 GO:0003680
Phac3g03606 374 SUPERFAMILY AF0104/ALDC/Ptd012-like 164 280 - -
Phac3g03606 374 MobiDBLite consensus disorder prediction 1 33 - -
Phac3g03606 374 MobiDBLite consensus disorder prediction 47 157 - -
Phac3g03606 374 MobiDBLite consensus disorder prediction 307 322 - -
Phac3g03606 374 ProSiteProfiles PPC domain profile profile. 160 300 IPR005175 -
Phac3g03606 374 MobiDBLite consensus disorder prediction 1 16 - -
Phac3g03606 374 MobiDBLite consensus disorder prediction 285 300 - -
Phac3g03606 374 Gene3D - 166 291 - -
Phac3g03606 374 SMART AT_hook_2 140 152 IPR017956 GO:0003677
Phac3g03606 374 SMART AT_hook_2 86 98 IPR017956 GO:0003677
Phac3g03606 374 MobiDBLite consensus disorder prediction 285 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03606 Phac-Chr3 36122484 36127709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03606 9 374 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 45.278 4.70e-78 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03606 - - gmx:100789717 489.96