Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03585 ATGGGAGGGGCAACACTGCCACCAGGATTTCGTTTCCATCCAACTGATGAGGAACTGGTGGGATACTACCTTAAAAGAAAAGTAGAGGGGCTTGAAATTGAGCTTGAAGTCATCCCTGTGATTGATTTTTACAAATTCGATCCCTGGGAGTTGCCGGAGAAGTCTTTCCTTCCAAAGCGGGATATGGAATGGTTTTTCTTTTGTCCGCGGGATCGCAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGGTATTGGAAAGCCACTGGAAAAGACAGAAAGGTGGTGTGCCAGTCTAATCCATCCAATGTTACAGGGTATCGCAAGACCTTGGTCTTCTATGCTGGGAGGGCCCCTTTAGGAGATAGAACTGATTGGGTCATGCATGAGTATCGCCTCTGTGATGATCTTGGCCAACCCACACCATCTTTCCAGGGTGGTTTTGCCTTGTGCCGGGTTATTAAGAAGAATGAGAAGGCAAGTGCTACACAGGGAGAAAACAAGGGCAAAAGGGCTGGAAGCAGTTCCATCAATGGGAGTGACACCTCAGTGAGAGTCTCTGGTGAGCCATTCAGCAACTCTGGTGATTCTTCCTCTCAAGCGAGCCACCTGAATAATGAGAGTCGTTATTCAAGCCCAATTTCTTCTCCATACAATGTGCCTCCAATGGGAGAGATTAACCTAGCTTCTCTGGAAGCCAATCCTTCAAACTTCTGGATCTCCCCCGACATGATTCTTGATTCTTCAAAGGACTACCCTGAATTACAACATGCTGTGGCTGAATATTTTCCACGGTATGACTTACCAAGTATGGGGACACAATTTCAATCATTGGAACATTCAGAAACTCCATCTAGTTTCTCCTACTCAAATGTCAATGGAGAAGTTGAATTTGCTGATACTCTCAGTCAAATCATGTCACCTTACTCAGGACAATGGAATTCCATGGACTTCTATGGAAAAGGAGGTGTCCCTTATGAAGATCATGATCAAATTAACTCAATCTCATATCCATGA 1026 0.4483 MGGATLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPEKSFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKVVCQSNPSNVTGYRKTLVFYAGRAPLGDRTDWVMHEYRLCDDLGQPTPSFQGGFALCRVIKKNEKASATQGENKGKRAGSSSINGSDTSVRVSGEPFSNSGDSSSQASHLNNESRYSSPISSPYNVPPMGEINLASLEANPSNFWISPDMILDSSKDYPELQHAVAEYFPRYDLPSMGTQFQSLEHSETPSSFSYSNVNGEVEFADTLSQIMSPYSGQWNSMDFYGKGGVPYEDHDQINSISYP* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03585 341 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Phac3g03585 341 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Phac3g03585 341 MobiDBLite consensus disorder prediction 162 220 - -
Phac3g03585 341 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Phac3g03585 341 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Phac3g03585 341 FunFam Nac domain-containing protein 86 15 162 - -
Phac3g03585 341 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 214 - -
Phac3g03585 341 MobiDBLite consensus disorder prediction 170 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03585 Phac-Chr3 36029517 36032324 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03585 1 300 NAC Transcription Factor Family AT4G17980 53.974 9.83e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phac3g03585 NAM 1.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03585 - - gmx:100792714 613.224