Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03570 ATGATGAAGTGCATAGCGCTTGGTGCAGTTGAGTTCCTCAGCAAACCACTCTCCGAGGACAAGCTCAAAAATATCTGGCAGCATGTGGTTCACAAGGCATTCAGTTCTGGGACAAGTATCCTGTGTGAATCGCTTAAACCTGTCAAGGAATCTGTAGTGTCCATGTTGCAGCTCCAAAAAGACAATGAACAACATGAAAGTAGCGTATCCATTGATATAGAGAAAGTATCCAGGTTTACTGATAATGATCATGTACTCTCTCCTGGAAATGATAAATATCCAGCTCCTTCAACCCCACAATTGATGCATGGGACAAGATTGTTAGACGATGGTGATTGCCAAGAGCAGACTAATTGCTCAACAGAAAAAGAAAGTGGGGAACATGATGGAGAATCTAAATCTGTCGAAACTACATGTGGAAATTTGAATGCTGAAACTGAAAGTACTGCTCAAGAGAGGAAATCGGAAATTACTTTGGCTAGGAAGGAAGTGGATTTAGTTGACACTTCCAAGGGTGAGAGTGTTGCTTCTCAACATACACAAAAAAGAAAGGTTGTAAGCAACACTGACAAAAATACAAAATCTCCAAATAAAGTAGGTGTTCCTAGTGATTCATGTGAGATAAGACCAAGTCGGAAGAAGATGAAAGTAGACTGGACGCCTGAGCTGCACAAAAAATTTGTGAAGGCTGTTGAGCAACTAAGCATTGATCAAGCCATTCCTTCTAGAATATTAGAATTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGAAGTACAGAATGCACAAGAGACAAATCTTTCCCAAGGAAGAAGAGCGGAAATGGTTGAATCATAGAGAAAGGAGCTATTGTCTTCAAAGACCAATTATGGCCTTTCCTCCATATCATTCTAATCACACACTTCCTCTGGCTCCTGCATATCCTATGTGGGGACAATCTAGCAGTCAAACGGCTGGCATGCAGATTTGGAGCTCTCCTGGTTATCCCATGTGGCAGCCTACTGCTGAAAATTGGCACTGGAAACCATTTCCAAGGATGCATGCAGATGCATGGGGCTGTCCAGTGTTACCAGTACCACCTCCTCAAGCTCCTTTTCCCTACTCTCAGAATATGCCTGCGTTGCTCAATGCTGATGCTGCAGATCACACGTTTACCATGCCACAAAGTTCCATAGAGCATTATCCGGCACAGGAGGTGGTTGACAAGGTTGTGAAAGAGGCAGTAAGCAAACCATGGTTACCCTTGCCTTTGGGCCTGAAACCTCCTTCCACAGACAGTGTGTTGGCTGAGTTATCAAGGCAAGGCATTTCAAGCATCCCTCCTAGGAGCAACAAGGGTTCAAATTCAGGCTGA 1371 0.4369 MMKCIALGAVEFLSKPLSEDKLKNIWQHVVHKAFSSGTSILCESLKPVKESVVSMLQLQKDNEQHESSVSIDIEKVSRFTDNDHVLSPGNDKYPAPSTPQLMHGTRLLDDGDCQEQTNCSTEKESGEHDGESKSVETTCGNLNAETESTAQERKSEITLARKEVDLVDTSKGESVASQHTQKRKVVSNTDKNTKSPNKVGVPSDSCEIRPSRKKMKVDWTPELHKKFVKAVEQLSIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQIFPKEEERKWLNHRERSYCLQRPIMAFPPYHSNHTLPLAPAYPMWGQSSSQTAGMQIWSSPGYPMWQPTAENWHWKPFPRMHADAWGCPVLPVPPPQAPFPYSQNMPALLNADAADHTFTMPQSSIEHYPAQEVVDKVVKEAVSKPWLPLPLGLKPPSTDSVLAELSRQGISSIPPRSNKGSNSG* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03570 456 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 448 IPR044825 GO:0003700|GO:0045893
Phac3g03570 456 NCBIfam myb-like DNA-binding domain, SHAQKYF class 214 269 IPR006447 GO:0003677
Phac3g03570 456 MobiDBLite consensus disorder prediction 110 154 - -
Phac3g03570 456 MobiDBLite consensus disorder prediction 170 207 - -
Phac3g03570 456 Pfam Myb-like DNA-binding domain 217 266 IPR001005 -
Phac3g03570 456 SUPERFAMILY Homeodomain-like 212 271 IPR009057 -
Phac3g03570 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 211 270 IPR017930 -
Phac3g03570 456 Gene3D - 211 272 - -
Phac3g03570 456 MobiDBLite consensus disorder prediction 433 456 - -
Phac3g03570 456 FunFam Two-component response regulator 210 272 - -
Phac3g03570 456 MobiDBLite consensus disorder prediction 426 456 - -
Phac3g03570 456 ProSiteProfiles Response regulatory domain profile. 1 30 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03570 Phac-Chr3 35877365 35884093 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03570 2 449 Response Regulator Gene Family AT4G18020 46.868 1.35e-94 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g03570 Myb_DNA-binding 5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03570 - - gmx:100777535 770.77