Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03567 ATGACTTCTAACAACCATTGCCTGAACACCATGATGAAGTGCATAGCGCTTGGTGCAGTTGAGTTCCTCAGCAAACCACTCTCCGAGGACAAGCTCAAAAATATCTGGCAGCATGTGGTTCACAAGGCATTCAGTTCTGGGACAAGTATCCTGTGTGAATCGCTTAAACCTGTCAAGGAATCTGTAGTGTCCATGTTGCAGCTCCAAAAAGACAATGAACAACATGAAAGTAGCGTATCCATTGATATAGAGAAAGTATCCAGGTTTACTGATAATGATCATGTACTCTCTCCTGGAAATGATAAATATCCAGCTCCTTCAACCCCACAATTGATGCATGGGACAAGATTGTTAGACGATGGTGATTGCCAAGAGCAGACTAATTGCTCAACAGAAAAAGAAAGTGGGGAACATGATGGAGAATCTAAATCTGTCGAAACTACATGTGGAAATTTGAATGCTGAAACTGAAAGTACTGCTCAAGAGAGGAAATCGGAAATTACTTTGGCTAGGAAGGAAGTGGATTTAGTTGACACTTCCAAGGGTGAGAGTGTTGCTTCTCAACATACACAAAAAAGAAAGGTTGTAAGCAACACTGACAAAAATACAAAATCTCCAAATAAAGTAGGTGTTCCTAGTGATTCATGTGAGATAAGACCAAGTCGGAAGAAGATGAAAGTAGACTGGACGCCTGAGCTGCACAAAAAATTTGTGAAGGCTGTTGAGCAACTAAGCATTGATCAAGCCATTCCTTCTAGAATATTAGAATTAATGAAAGTGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGAAGTACAGAATGCACAAGAGACAAATCTTTCCCAAGGAAGAAGAGCGGAAATGGTTGAATCATAGAGAAAGGAGCTATTGTCTTCAAAGACCAATTATGGCCTTTCCTCCATATCATTCTAATCACACACTTCCTCTGGCTCCTGCATATCCTATGTGGGGACAATCTAGCAGTCAAACGGCTGGCATGCAGATTTGGAGCTCTCCTGGTTATCCCATGTGGCAGCCTACTGCTGAAAATTGGCACTGGAAACCATTTCCAAGGATGCATGCAGATGCATGGGGCTGTCCAGTGTTACCAGTACCACCTCCTCAAGCTCCTTTTCCCTACTCTCAGAATATGCCTGCGTTGCTCAATGCTGATGCTGCAGATCACACGTTTACCATGCCACAAAGTTCCATAGAGCATTATCCGGCACAGGAGGTGGTTGACAAGGTTGTGAAAGAGGCAGTAAGCAAACCATGGTTACCCTTGCCTTTGGGCCTGAAACCTCCTTCCACAGACAGTGTGTTGGCTGAGTTATCAAGGCAAGGCATTTCAAGCATCCCTCCTAGGAGCAACAAGGGTTCAAATTCAGGCTGA 1401 0.4368 MTSNNHCLNTMMKCIALGAVEFLSKPLSEDKLKNIWQHVVHKAFSSGTSILCESLKPVKESVVSMLQLQKDNEQHESSVSIDIEKVSRFTDNDHVLSPGNDKYPAPSTPQLMHGTRLLDDGDCQEQTNCSTEKESGEHDGESKSVETTCGNLNAETESTAQERKSEITLARKEVDLVDTSKGESVASQHTQKRKVVSNTDKNTKSPNKVGVPSDSCEIRPSRKKMKVDWTPELHKKFVKAVEQLSIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRQIFPKEEERKWLNHRERSYCLQRPIMAFPPYHSNHTLPLAPAYPMWGQSSSQTAGMQIWSSPGYPMWQPTAENWHWKPFPRMHADAWGCPVLPVPPPQAPFPYSQNMPALLNADAADHTFTMPQSSIEHYPAQEVVDKVVKEAVSKPWLPLPLGLKPPSTDSVLAELSRQGISSIPPRSNKGSNSG* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03567 466 NCBIfam myb-like DNA-binding domain, SHAQKYF class 224 279 IPR006447 GO:0003677
Phac3g03567 466 MobiDBLite consensus disorder prediction 180 217 - -
Phac3g03567 466 Pfam Myb-like DNA-binding domain 227 276 IPR001005 -
Phac3g03567 466 MobiDBLite consensus disorder prediction 443 466 - -
Phac3g03567 466 ProSiteProfiles Response regulatory domain profile. 1 40 IPR001789 GO:0000160
Phac3g03567 466 MobiDBLite consensus disorder prediction 94 167 - -
Phac3g03567 466 SUPERFAMILY CheY-like 2 43 IPR011006 -
Phac3g03567 466 Gene3D - 221 282 - -
Phac3g03567 466 FunFam Two-component response regulator 220 282 - -
Phac3g03567 466 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 458 IPR044825 GO:0003700|GO:0045893
Phac3g03567 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 280 IPR017930 -
Phac3g03567 466 SUPERFAMILY Homeodomain-like 222 281 IPR009057 -
Phac3g03567 466 MobiDBLite consensus disorder prediction 436 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03567 Phac-Chr3 35877365 35884093 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03567 1 459 Response Regulator Gene Family AT4G18020 46.835 1.37e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phac3g03567 Myb_DNA-binding 5.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03567 - - gmx:100777535 793.112