Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03556 ATGTCAAAGTTGGTAACATTGACCAAATTCTCTATAAATAGGAGAAATCCGGTTCCCTATTGCATTGCCAAGCTTGTCTTCTTATCTTATTCCTTGCTTTTAGTCTTTCATAATTCTGTCATACAAATGGCTCTTTCTCTTTTGTGTCCTCTTCTTGCCACCTTTCTTTTCATGCAAACTCTGGCAGATACTTCCTTTATTCAATCTCGTGCAGCATATTACCCAAACTCTGAAGAAAATGGCACAGACGTTGGTGCATGTGGATATGGTTCCTTTGGTGCCACGGTTAATGGTGGGGATGTATCAGCTGCATCTAATCTTTATCGAAATGGTGTTGGCTGTGGTGCCTGTTACCAGGTGAGATGTAGCAATAGTGCTTATTGCTCAGGAAATGGTGTCACCATAGTAATAACTGACCAAGGCTCAAGTGCTAACACTGACTTCATTCTTAGCCAACGTGCTTTTGGTGGGATGGCTATCAACAAGGATGCAGCTGCTTCTCTATTAGCTCTTGGCATAGTTGATATTGAGTATAGACGGGTTTCATGCAGCTACCCAAACAAAAACATTACAGTTAAGATACATGAGAGTAGCAACAACCCTCACTATTTGGGTTTTGTCTTATGGTTTCAACAAGGAAGTAGAGATATAACTGCTGTGCAACTTTGCGAGACTCAGAACTTTGTGTGCAAGTTACTGGATCGGAGTCATGGGGCAGTATGGACCACTACCGCGCCACCGAGTGGACCTCTGGCTTTGAGGATGTTGTTTAGTGCTGAAGAAGAGGGAGACGAATCATGGGTCGTTCCAGTTAATGACATTCCACAAGACTGGAAGGCTGGAGAAACGTACGACTTAGGGATACAAGTCGACCAATAG 879 0.4312 MSKLVTLTKFSINRRNPVPYCIAKLVFLSYSLLLVFHNSVIQMALSLLCPLLATFLFMQTLADTSFIQSRAAYYPNSEENGTDVGACGYGSFGATVNGGDVSAASNLYRNGVGCGACYQVRCSNSAYCSGNGVTIVITDQGSSANTDFILSQRAFGGMAINKDAAASLLALGIVDIEYRRVSCSYPNKNITVKIHESSNNPHYLGFVLWFQQGSRDITAVQLCETQNFVCKLLDRSHGAVWTTTAPPSGPLALRMLFSAEEEGDESWVVPVNDIPQDWKAGETYDLGIQVDQ* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03556 292 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 84 188 IPR007112 -
Phac3g03556 292 Pfam Expansin C-terminal domain 190 260 IPR007117 -
Phac3g03556 292 PANTHER EXPANSIN-B3 51 289 - -
Phac3g03556 292 Gene3D - 185 290 IPR036749 -
Phac3g03556 292 SUPERFAMILY PHL pollen allergen 188 285 IPR036749 -
Phac3g03556 292 Pfam Lytic transglycolase 104 178 IPR009009 -
Phac3g03556 292 Gene3D - 53 184 IPR036908 -
Phac3g03556 292 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 202 286 IPR007117 -
Phac3g03556 292 PRINTS Expansin/Lol pI family signature 272 286 IPR007118 GO:0005576
Phac3g03556 292 PRINTS Expansin/Lol pI family signature 83 101 IPR007118 GO:0005576
Phac3g03556 292 PRINTS Expansin/Lol pI family signature 171 187 IPR007118 GO:0005576
Phac3g03556 292 CDD DPBB_EXLB_N 67 183 - -
Phac3g03556 292 SUPERFAMILY Barwin-like endoglucanases 54 187 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03556 Phac-Chr3 35813247 35815590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03556 29 288 Expansin Gene Family AT4G17030 40.996 1.81e-57 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03556 - - gmx:100812555 473.396