Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03505 ATGGAACTTAGCTTCAAGCACCAACTTGGCCTTGTTTGTATCATACTGCTCTTTCCTGCACTGTGTCACTGCCAGGAATATACTAAATCCAGAGCAACCTTTTATAGTACCTCTGATGACTATGGGACTCCAACGGGAGCTTGTGGATTTGGAGAATATGGAAGGAAGATGAATTGGTATGATGGAAGAGTCGCAGGGGTCTCTGGGCTATGGAGCAATGGAGTTGGGTGTGGGACATGCTATCAAGTAAAGTGCCTTATAGAGAAGCTATGCGATGAGAATGGAGCGTACCTGGTGGCAACAGACCAGGGTTATGGAGACAACACAGACTTCGTGATGAGCCCACGCGCCTTCATAGAACTGGGACGTGATCAAAATGCTTACGAAGAGCTTAAGAAATACGGTACAGTGGAGATTGAATACAAAAGGGTTCCGTGTACTTACACCGGCAACGTCTTGTTCTATATCAAGGAAACTAGCAGCAACCCTGGTTACTTTGCCGTGGTCATTCTGAATGTAAATGGAATAAACGACGTGACTGCTGTTGAAATGTGGCAGTCTGGAGAATGGAAGGCACTTAACAGGAACTATGGAGCAGTGTTTGACTTTCCTAACCCTCCGAGTGGCGAAATCAGGTTGAGGTTTAAGGTGAGTGGCATGTCTGATTGGGTGGATCCCAAGATTGTCATTCCTAGTAACTGGCAGCCTGGAAGCACTCATGTCACTGAGGTGCAGCTTAAATAG 744 0.4637 MELSFKHQLGLVCIILLFPALCHCQEYTKSRATFYSTSDDYGTPTGACGFGEYGRKMNWYDGRVAGVSGLWSNGVGCGTCYQVKCLIEKLCDENGAYLVATDQGYGDNTDFVMSPRAFIELGRDQNAYEELKKYGTVEIEYKRVPCTYTGNVLFYIKETSSNPGYFAVVILNVNGINDVTAVEMWQSGEWKALNRNYGAVFDFPNPPSGEIRLRFKVSGMSDWVDPKIVIPSNWQPGSTHVTEVQLK* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03505 247 Pfam Lytic transglycolase 64 139 IPR009009 -
Phac3g03505 247 Gene3D - 20 146 IPR036908 -
Phac3g03505 247 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Phac3g03505 247 PRINTS Expansin/Lol pI family signature 190 204 IPR007118 GO:0005576
Phac3g03505 247 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576
Phac3g03505 247 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Phac3g03505 247 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Phac3g03505 247 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Phac3g03505 247 PANTHER EXPANSIN-B3 18 245 - -
Phac3g03505 247 SUPERFAMILY Barwin-like endoglucanases 13 151 IPR036908 -
Phac3g03505 247 Pfam Expansin C-terminal domain 154 231 IPR007117 -
Phac3g03505 247 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 242 IPR007117 -
Phac3g03505 247 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 151 IPR007112 -
Phac3g03505 247 SUPERFAMILY PHL pollen allergen 152 240 IPR036749 -
Phac3g03505 247 Gene3D - 147 242 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03505 Phac-Chr3 35383874 35385417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03505 1 246 Expansin Gene Family AT4G17030 44.048 8.80e-73 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03505 - - gmx:100777265 461.84