Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03504 ATGGAACTGGGTTTTAGCCACCAACTTGGCCTTGTTTGTGTCATACTGCTCTTCCCTGCACTGTGTGACTGCAAGGAATATTTCTCCAACTCAAGAGCAACCTATTATGGCACCCCTGATGGCAACGGTACTCCAACTGGAGCTTGTGGATTCGGGGAGTATGGAAGGAAGATGAATTGGTATGATGGAAGAGTCGCAGGGGTCTCTGGGCTATGGAGGAATGGAGCTGCTTGTGGAACGTGTTATCAGGTAAAGTGCAAAATAGAAGAACTGTGCGATGTGAATGGAGCATACCTGGTCGCAACAGACCAGGGTTATGGAGACAGAACAGACTTTGTGATGAGCCGAAACGCCTTCTCAAGATTGGGACGCAATGAAAAAGCATCTGCAGAGCTTAAGAAATATGGTACAGTGGATATTGAATACAGGAGAGTTCCATGTACCTACATCGGCAACGTCTTGTTTCACATAAAGGAAAGTAGCAGCAACCCTGGTTACTTGGCTGTTGTGATTCTGAATGTAAATGGAAAATACGATGTCAATGCTGTTGAAATGTGGCAGAAAGGGAAAGAACGATGGGAAGCCTTGCGCAGGGTCTATGGGGCAGTGTTTCATTTTGCTAATCCACCAAGAGGTGAAATCCTCTTGAGGTTTCAAGTGGGTGTTAAATGGATGATACCAAACATCCCTATCCCTGCTAATTGGAAGCCTGGAGCAACTTATGACACCAAACTTCAGCTTTACTAG 747 0.4565 MELGFSHQLGLVCVILLFPALCDCKEYFSNSRATYYGTPDGNGTPTGACGFGEYGRKMNWYDGRVAGVSGLWRNGAACGTCYQVKCKIEELCDVNGAYLVATDQGYGDRTDFVMSRNAFSRLGRNEKASAELKKYGTVDIEYRRVPCTYIGNVLFHIKESSSNPGYLAVVILNVNGKYDVNAVEMWQKGKERWEALRRVYGAVFHFANPPRGEILLRFQVGVKWMIPNIPIPANWKPGATYDTKLQLY* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03504 248 Pfam Lytic transglycolase 65 141 IPR009009 -
Phac3g03504 248 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 243 IPR007117 -
Phac3g03504 248 Gene3D - 151 248 IPR036749 -
Phac3g03504 248 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 152 IPR007112 -
Phac3g03504 248 Pfam Expansin C-terminal domain 154 226 IPR007117 -
Phac3g03504 248 PANTHER EXPANSIN-B3 17 246 - -
Phac3g03504 248 SUPERFAMILY Barwin-like endoglucanases 16 152 IPR036908 -
Phac3g03504 248 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Phac3g03504 248 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Phac3g03504 248 PRINTS Expansin/Lol pI family signature 135 151 IPR007118 GO:0005576
Phac3g03504 248 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Phac3g03504 248 PRINTS Expansin/Lol pI family signature 68 86 IPR007118 GO:0005576
Phac3g03504 248 Gene3D - 21 148 IPR036908 -
Phac3g03504 248 SUPERFAMILY PHL pollen allergen 152 242 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03504 Phac-Chr3 35377408 35378974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03504 3 247 Expansin Gene Family AT4G17030 48.221 3.19e-76 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03504 - - gmx:100778424 414.461