Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03502 ATGGGCAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAGCACACCACTTTGGCGTAATGGGCCACCTGAGAAGCCTGTACTATGCAATGCATGTGGATCTCGATGGAGGACTAAAGGAACACTTGCAAATTATACCCCTTTGCATGCACGGGCAGAAAATGTTGATTATGAGGATCAAAAGGTTTCCAGGGTAAAAAGCATATCATTAAATAAGAACAAAGAAGTCAAATTGGTCAAGCGAAAGCATGATTATGATATTGCTGCATCTGGAGGGTTCATTCCAGATTTTAATCAAGGACACCGAAAGGTTGTGGATGAAGATACAAGCAATAGATCAAGCTCAGGGTCTGCTGTCTCTAACTCGGAGAGCTGTGCTCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGCCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCTAAAAAGAGGACATGTTCAGGTCGTCCAAAGCCTTCATCTGTTGAGAAGCTCACAAGAGACCTGTGTACTATTCTTCATGAACAACAGTCTTATTTCTCTGCATCTTCTGAAGAGGATCTTCTTTTTGAAAGTGACACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTCTATAGCTCGTGATGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAAACAATGCCTAATGAATGAAGCATATTCATTCTCTAGTACGATTCCTTTGTATAGTAGTGATCACAGTGGCATGAACTTCTCATCTCATGGAGTTGAAAAGATCAAAAGCTCTGCTGGCCAAATCATGCAACAAGAGAAACTTGAAAGGGACAAGTCTCAGCTTGAAAAACTACAAGTTCCTGGAAATCACAATTCACTGTTGTGCTCAATAGATTTAAATGATGTAGTGAATTACGAGGAGTTTATGAGGAACTTGACAAATGAAGAGCAGCAGCAATTACTGAAGTATCTCCCTGTTGTTGATACCGCTAAATTTACTGATAGCCTTAAAAACATGTTCAGTAGCTTCCAATTCAAGGAGAACTTGATTTATTTTCAGCAACTTCTTGGGGAAGGTGTCTTTGACATCTCTTTGTTGGGGAAAAAACCTGAAGAATGGAAGACATTGAAAAGGCTTGTGTTATCTAATATGTCAAAGTCAAAATGGGTTGAACAGTATAATTTTCTCAAGAAATGCGAAAAAGAAGCTGGAAAAACTATTGGTCTGGGATCTACTGCTATGGAATCAAGTAATGTTACAAATGCCAAGAGAATGCGTGAGCATGACAGCCAAAATCCAAATTTTTCAGAATTGAAGACAACAATGAGGAGCCCCAAAAGGGTGATCATAAAGCCTATCTGTGAAGGCAAAGAAGTTGTAGAAGAAGGCTCAAGCTTCAGCCCAAAAAGCCTATTTGCTTTGCCCCATGGTGTTGGTGACTTGCACGTGCTGGATTCTTTTAACTATGTTGGTGAGAGTTCTGAGGATCTGCTGTTAGATGTGCCTTCTAACAGTTCTTTTCCGCAGGCAGAGCTCCTGCTCCCAACTTTAAGCTATGGTGCTAAGGTCTGCACCACTAGTAGCTCAATACACTCAACCGTTACGCATCCTTAA 1632 0.4161 MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAENVDYEDQKVSRVKSISLNKNKEVKLVKRKHDYDIAASGGFIPDFNQGHRKVVDEDTSNRSSSGSAVSNSESCAQFGGTDASDLTGPAQSVVWDAMVPSKKRTCSGRPKPSSVEKLTRDLCTILHEQQSYFSASSEEDLLFESDTPMVSVEIGHGSILIRHPSSIARDEESEASSLSVDNKQCLMNEAYSFSSTIPLYSSDHSGMNFSSHGVEKIKSSAGQIMQQEKLERDKSQLEKLQVPGNHNSLLCSIDLNDVVNYEEFMRNLTNEEQQQLLKYLPVVDTAKFTDSLKNMFSSFQFKENLIYFQQLLGEGVFDISLLGKKPEEWKTLKRLVLSNMSKSKWVEQYNFLKKCEKEAGKTIGLGSTAMESSNVTNAKRMREHDSQNPNFSELKTTMRSPKRVIIKPICEGKEVVEEGSSFSPKSLFALPHGVGDLHVLDSFNYVGESSEDLLLDVPSNSSFPQAELLLPTLSYGAKVCTTSSSIHSTVTHP* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03502 543 PANTHER OSJNBB0038F03.10 PROTEIN 1 522 IPR044589 -
Phac3g03502 543 SMART GATA_3 1 53 IPR000679 GO:0006355|GO:0043565
Phac3g03502 543 MobiDBLite consensus disorder prediction 110 132 - -
Phac3g03502 543 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Phac3g03502 543 Pfam Asx homology domain 288 376 IPR028020 -
Phac3g03502 543 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Phac3g03502 543 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 46 - -
Phac3g03502 543 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Phac3g03502 543 Gene3D - 284 387 IPR038108 -
Phac3g03502 543 CDD ZnF_GATA 6 55 IPR000679 GO:0006355|GO:0043565
Phac3g03502 543 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 296 407 IPR044867 -
Phac3g03502 543 Gene3D - 3 83 IPR013088 GO:0006355|GO:0008270
Phac3g03502 543 MobiDBLite consensus disorder prediction 99 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03502 Phac-Chr3 35367676 35373585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03502 1 519 C2C2-Gata Transcription Factor Family AT4G17570 51.667 1.35e-150 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac3g03502 ASXH 3.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03502 - - vum:124834311 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g00867 2 5485473 5492175 Phac3g03502 3 35367676 35373585 PCT