Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03501 ATGTTATGTGAACAAAAGAAAGTAAGAGAAGGAAATGAAGATAATTGTGCTTTTGCAAAATGCACACCACTTTGGCGTAATGGGCCACCTGAGAAGCCTGTACTATGCAATGCATGTGGATCTCGATGGAGGACTAAAGGAACACTTGCAAATTATACCCCTTTGCATGCACGGGCAGAAAATGTTGATTATGAGGATCAAAAGGTTTCCAGGGTAAAAAGCATATCATTAAATAAGAACAAAGAAGTCAAATTGGTCAAGCGAAAGCATGATTATGATATTGCTGCATCTGGAGGGTTCATTCCAGATTTTAATCAAGGACACCGAAAGGTTGTGGATGAAGATACAAGCAATAGATCAAGCTCAGGGTCTGCTGTCTCTAACTCGGAGAGCTGTGCTCAATTTGGTGGCACAGATGCTAGTGATTTGACAGGCCCTGCTCAGTCAGTGGTCTGGGATGCCATGGTGCCTTCTAAAAAGAGGACATGTTCAGGTCGTCCAAAGCCTTCATCTGTTGAGAAGCTCACAAGAGACCTGTGTACTATTCTTCATGAACAACAGTCTTATTTCTCTGCATCTTCTGAAGAGGATCTTCTTTTTGAAAGTGACACACCAATGGTCTCTGTTGAGATAGGACATGGAAGCATTCTCATCAGGCATCCTAGCTCTATAGCTCGTGATGAAGAGTCTGAGGCTAGCTCTCTTTCAGTTGATAATAAACAATGCCTAATGAATGAAGCATATTCATTCTCTAGTACGATTCCTTTGTATAGTAGTGATCACAGTGGCATGAACTTCTCATCTCATGGAGTTGAAAAGATCAAAAGCTCTGCTGGCCAAATCATGCAACAAGAGAAACTTGAAAGGGACAAGTCTCAGCTTGAAAAACTACAAGTTCCTGGAAATCACAATTCACTGTTGTGCTCAATAGATTTAAATGATGTAGTGAATTACGAGGAGTTTATGAGGAACTTGACAAATGAAGAGCAGCAGCAATTACTGAAGTATCTCCCTGTTGTTGATACCGCTAAATTTACTGATAGCCTTAAAAACATGTTCAGTAGCTTCCAATTCAAGGAGAACTTGATTTATTTTCAGCAACTTCTTGGGGAAGGTGTCTTTGACATCTCTTTGTTGGGGAAAAAACCTGAAGAATGGAAGACATTGAAAAGGCTTGTGTTATCTAATATGTCAAAGTCAAAATGGGTTGAACAGTATAATTTTCTCAAGAAATGCGAAAAAGAAGCTGGAAAAACTATTGGTCTGGGATCTACTGCTATGGAATCAAGTAATGTTACAAATGCCAAGAGAATGCGTGAGCATGACAGCCAAAATCCAAATTTTTCAGAATTGAAGACAACAATGAGGAGCCCCAAAAGGGTGATCATAAAGCCTATCTGTGAAGGCAAAGAAGTTGTAGAAGAAGGCTCAAGCTTCAGCCCAAAAAGCCTATTTGCTTTGCCCCATGGTGTTGGTGACTTGCACGTGCTGGATTCTTTTAACTATGTTGGTGAGAGTTCTGAGGATCTGCTGTTAGATGTGCCTTCTAACAGTTCTTTTCCGCAGGCAGAGCTCCTGCTCCCAACTTTAAGCTATGGTGCTAAGGTCTGCACCACTAGTAGCTCAATACACTCAACCGTTACGCATCCTTAA 1653 0.409 MLCEQKKVREGNEDNCAFAKCTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAENVDYEDQKVSRVKSISLNKNKEVKLVKRKHDYDIAASGGFIPDFNQGHRKVVDEDTSNRSSSGSAVSNSESCAQFGGTDASDLTGPAQSVVWDAMVPSKKRTCSGRPKPSSVEKLTRDLCTILHEQQSYFSASSEEDLLFESDTPMVSVEIGHGSILIRHPSSIARDEESEASSLSVDNKQCLMNEAYSFSSTIPLYSSDHSGMNFSSHGVEKIKSSAGQIMQQEKLERDKSQLEKLQVPGNHNSLLCSIDLNDVVNYEEFMRNLTNEEQQQLLKYLPVVDTAKFTDSLKNMFSSFQFKENLIYFQQLLGEGVFDISLLGKKPEEWKTLKRLVLSNMSKSKWVEQYNFLKKCEKEAGKTIGLGSTAMESSNVTNAKRMREHDSQNPNFSELKTTMRSPKRVIIKPICEGKEVVEEGSSFSPKSLFALPHGVGDLHVLDSFNYVGESSEDLLLDVPSNSSFPQAELLLPTLSYGAKVCTTSSSIHSTVTHP* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03501 550 PANTHER OSJNBB0038F03.10 PROTEIN 21 529 IPR044589 -
Phac3g03501 550 Pfam Asx homology domain 295 383 IPR028020 -
Phac3g03501 550 MobiDBLite consensus disorder prediction 117 139 - -
Phac3g03501 550 Pfam GATA zinc finger 15 48 IPR000679 GO:0006355|GO:0043565
Phac3g03501 550 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 53 - -
Phac3g03501 550 CDD ZnF_GATA 15 62 IPR000679 GO:0006355|GO:0043565
Phac3g03501 550 SMART GATA_3 8 60 IPR000679 GO:0006355|GO:0043565
Phac3g03501 550 MobiDBLite consensus disorder prediction 106 139 - -
Phac3g03501 550 Gene3D - 14 90 IPR013088 GO:0006355|GO:0008270
Phac3g03501 550 Gene3D - 291 394 IPR038108 -
Phac3g03501 550 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 303 414 IPR044867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03501 Phac-Chr3 35367676 35373585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03501 22 526 C2C2-Gata Transcription Factor Family AT4G17570 50.570 2.67e-137 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Phac3g03501 ASXH 3.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03501 - - vum:124834311 944.88