Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03495 ATGTCATCATGCTCTCCAATAGAGTTAGAGACTAAAATGTCACAATCAAGTACGGATTTGATTGCAAGAGGTGGACAGGATGGTGGAAATACAATATCATACTCTCAAAGAGCAATGGAAGTTGAAACAGTGGACGTTGCTGTGAATTTGAATGCAAGTTATGAACAGGGTGGTGGACAAGGTGAAATCACAACATTAGGCAATCCAAGTGCAATGGAAACTAAAATGACTGTCTCAAATGAGGAATTCACTGCTGGAAACACAACATTAAGCACTCCAAGAGCAATGGACACTGTGAATGTTGAGTCAAGTGAAGGCTTGAGTGCAAGACATGGACAGGGTTGTGGACAAGATGAAATCATAAGATTAGGCACTCCAAGAGAAATGGAGACCCAAATGATAGTCTCAAGTGAGGGTTTGACTGTTGGAAAGACCTCACTAAGCACTCAAAGAGCAATAGAGATTGTAAGGGTTGAGTCAAGTGGGGACATGATTGCTGGAAAGGCAACATCATGCACCACTCCAAGAGCAATGGAGATGGAATTGGTGGATGCAGGTGGAGATTCAATTGCAGAACAAAAGCAGGATCATGGACAAGGCAACAAGACAAAATTCAGCATTTCAAGGGAAATAGAGACAGAAACAGTGATCTTTAGGGCTGATTTGATGGCAACGCCTAAACAAATCTTTGGAAAAGGTGGAACATCAGGCACTCTAAGAGCAGTGAAGAATACAATGGAAGAGACAAGCATGGAGCCAATTGCTAGATGCAAAAGGGTTTGTGGACGAGGTGTAAGAGAAAAAGGTCCATCATCACCTGAAGGAAAAGCAGCAGACAAGAAAAGAGATTCACCTTTTCCTGAAAGAGCAGGGTCAGCTAAACGAGGTGCAAGAAGAGGCATGCAGGGTACATGGAACCATCCTACTCAGAAGAGGGCAAGAATAAGAGAAGAAAACAAGGAAATTTGTGATCATAGACCAAGCTCAATAATGGAAGAAGGTCCGTCATCACCCGAAAGACAAGCAGCAAACAACAAAAGAGGTTCACCTTTGCTTGAAAGAGTTAGGTCATGTAAAAGAGGCAGAAAAAGGGGCATGCAGGGTACATCAAGCCAACCTAGTCAGAAGAGGGTAAGACTAGTAGAACAAAACAAAGAAGTTAGTAATCCTGGACCAAGCTCAATAATGGAAAATGGTCCATCATCACTTGAAAGACAAGCAGCAAACAAGAAAAGAGGTTCACCTTCATCTGAAAGAGTAAGGTCATGTAAGAAAAGCACTTGTTTTTTATGGTTGATAGACTCTAGGATTATTAAGAAAGATGAACGAGTAAGCTATAAGAGTGCCACAATGAAAAAGGCATTAGCAGGAAGGATTACTAGGGGTGGAATTCTCTGCAGCTGTTGCCAGGAGGAGATATCAATGTGGACCTTTGAGAAGCATGCTGGAAGTGATCTTAGACAGCCCTATAAACATATTTACATTCACAGAAAACATAAATCCCTCCGAAAATGCCTGATTGAAGCTTGGCAACATGCTCGGGAACAAAAGCGTCGGCGCATGTTTTTGTATGTGCCAAAAGAAACTGATGCAGACCAAAATGATGATGTTTGTTCAGTCTGTGGCGATGGGGGAGACTTAATCTGTTGTGACAAGTGTCCTTCCACATATCATCTATCTTGCATGAATATAGAGACGGTTCCCCAAAATGATTGGTTTTGTCCATACTGTGTATGCAAACACTGTGGGCTGGTTGTGAACCTGGTTGTTGATAAAAAAGAATACTATGAGAAAAAAGAAGGCTTCAAGTGCTCCCAATGTGACAAGAAGTATCATTGGGAGTGCTTTGAAAAATCTGAAAAAGAATCCTCAAGACAAACTCCGGACTTTAACCCTTCAAGATCATATTGTGGGCAAGGTTGCCAACGGATACATGAGAAAATGGGAGTATATCTCGGAATCAGAAATGATTATTCGGCAAAATACTCTTGGAGGGTTATCCGCGTAATGGAGACATACAAGAAGAATACTGCAGATATGAATCTATTCTTAGAAAACAATTCAAGGGTTGCAGTTTCTTGGATGTTAATGAATGAAGCTTTTAAGACAATAACTGACAGGAAAACGGGCATCAATGTGATTCGAAGTATAGTTTACAGCTGCAAGTCAAACTTAACCAGGATTGATTTTAGCCGTTTTTATATGTTTGTTCTGGAGGAAGATGATGCGATCATTGCTGCAGCTTCTATAAGATTTCACGGGACAAGGATTGCAGAAATGCCATTTATTGTAACAGAAAGGGCACACAGGGGCCAAGGAGTTTGCCAGGAATTAATGAGGGTGATTGAATCGTTTCTATGCAATGTTAAAGTCGAGAAGTTGATAATTCCATCTGCTGTGGAGACTTGTGATATGTGGAAGCGCAAGTACAACTTTACTGAGGTGAGTGAAGAGCTGAAGAAAGAAATATCCTCCTATAATATTGTGATGTTCCCTTGTGCTGTAAGACTGTACAAGGACTTGTCAGCAAGCATAGCAGACATTAAGAATGATCTGGAACCACAAACAGAGCATGCAGAGGTTACTACTAGACTTGAACATGGATCCTCACCAGGAAGATTAGAAGAAGTAAAAGAGTTGTAG 2643 0.4113 MSSCSPIELETKMSQSSTDLIARGGQDGGNTISYSQRAMEVETVDVAVNLNASYEQGGGQGEITTLGNPSAMETKMTVSNEEFTAGNTTLSTPRAMDTVNVESSEGLSARHGQGCGQDEIIRLGTPREMETQMIVSSEGLTVGKTSLSTQRAIEIVRVESSGDMIAGKATSCTTPRAMEMELVDAGGDSIAEQKQDHGQGNKTKFSISREIETETVIFRADLMATPKQIFGKGGTSGTLRAVKNTMEETSMEPIARCKRVCGRGVREKGPSSPEGKAADKKRDSPFPERAGSAKRGARRGMQGTWNHPTQKRARIREENKEICDHRPSSIMEEGPSSPERQAANNKRGSPLLERVRSCKRGRKRGMQGTSSQPSQKRVRLVEQNKEVSNPGPSSIMENGPSSLERQAANKKRGSPSSERVRSCKKSTCFLWLIDSRIIKKDERVSYKSATMKKALAGRITRGGILCSCCQEEISMWTFEKHAGSDLRQPYKHIYIHRKHKSLRKCLIEAWQHAREQKRRRMFLYVPKETDADQNDDVCSVCGDGGDLICCDKCPSTYHLSCMNIETVPQNDWFCPYCVCKHCGLVVNLVVDKKEYYEKKEGFKCSQCDKKYHWECFEKSEKESSRQTPDFNPSRSYCGQGCQRIHEKMGVYLGIRNDYSAKYSWRVIRVMETYKKNTADMNLFLENNSRVAVSWMLMNEAFKTITDRKTGINVIRSIVYSCKSNLTRIDFSRFYMFVLEEDDAIIAAASIRFHGTRIAEMPFIVTERAHRGQGVCQELMRVIESFLCNVKVEKLIIPSAVETCDMWKRKYNFTEVSEELKKEISSYNIVMFPCAVRLYKDLSASIADIKNDLEPQTEHAEVTTRLEHGSSPGRLEEVKEL* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03495 880 SUPERFAMILY FYVE/PHD zinc finger 528 583 IPR011011 -
Phac3g03495 880 ProSiteProfiles Zinc finger PHD-type profile. 535 580 IPR019787 -
Phac3g03495 880 MobiDBLite consensus disorder prediction 857 880 - -
Phac3g03495 880 MobiDBLite consensus disorder prediction 310 328 - -
Phac3g03495 880 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 729 817 IPR016181 -
Phac3g03495 880 MobiDBLite consensus disorder prediction 262 419 - -
Phac3g03495 880 Gene3D - 715 830 - -
Phac3g03495 880 MobiDBLite consensus disorder prediction 364 378 - -
Phac3g03495 880 Pfam PHD-finger 537 579 IPR019787 -
Phac3g03495 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 525 601 IPR013083 -
Phac3g03495 880 CDD PHD2_CHD_II 537 577 - -
Phac3g03495 880 MobiDBLite consensus disorder prediction 386 410 - -
Phac3g03495 880 SMART PHD_3 537 578 IPR001965 -
Phac3g03495 880 SMART PHD_3 579 642 IPR001965 -
Phac3g03495 880 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 695 842 IPR000182 GO:0016747
Phac3g03495 880 PANTHER PHD FINGER PROTEIN 12 332 853 IPR042163 GO:0003714|GO:0045892
Phac3g03495 880 MobiDBLite consensus disorder prediction 262 295 - -
Phac3g03495 880 CDD NAT_SF 735 796 - -
Phac3g03495 880 Pfam Tify domain binding domain 457 509 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03495 Phac-Chr3 35275657 35284624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03495 397 843 PHD Transcription Factor Family AT4G14920 38.767 9.44e-102 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Phac3g03495 TDBD 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03495 - - pvu:PHAVU_009G190800g 1688.32