Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03486 ATGTTCGAACAAAGTAGTACATACGAATCGGATTTGGCACTCTATTCGATTCGCCGCCACTTGCTCGGCGAGTCCGAATCAATATTCGGAGCCCCAACATATGCATCGGGTCGGACCTCAAGTGTCAGCATCTTGTACTCCTGTTTGAGCGACAATTGGGGCGACCTTCCGTTAAAGGAGGACGATTCCGAAGACATGGTGCTCTACGGCGTGCTCCGGGACGCTGTTAAGGTGGGGTGGGTCCCTTCTCTTGAGGCCGGCTCGCCCGAGAGCGTGTTGTCGGGTTTTCCTACGGATTTCACGGTGAAGCTGGAACCGGACGTGTTGCCGACGGTGACGAGCTCGCCTCCTTTGACAGCGGTGGTGAAGCAGGAGAAGAAGGCTTCTCCCGCTAAGGGGAAGCACTACCGCGGTGTGCGGCAGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGGCGAAAAACGGGGCGCGGGTTTGGCTGGGAACGTTTGAGACCGCTGAGGATGCGGCGTTGGCTTACGACCGTGCCGCCTACCGTATGCGGGGGTCGAGGGCGTTGCTGAATTTTCCGTTGAGGGTTAACTCGGGCGAGCCCGACCCGGTGAGGGTGACTTCGAAGCGGTCTTCATCGCCGGAAAGTGGGGCGGGTCCGGCGAAGAGGAAGAAGGTGGGGGAGTCTGGGCAAGTGGGAAGTCAAGTGGCAGAGTGTAGACGTGGCGAGCAATTATTGGTTACCTGA 747 0.5944 MFEQSSTYESDLALYSIRRHLLGESESIFGAPTYASGRTSSVSILYSCLSDNWGDLPLKEDDSEDMVLYGVLRDAVKVGWVPSLEAGSPESVLSGFPTDFTVKLEPDVLPTVTSSPPLTAVVKQEKKASPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSSPESGAGPAKRKKVGESGQVGSQVAECRRGEQLLVT* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03486 248 PANTHER DNA-BINDING DOMAIN 116 221 IPR044808 GO:0003700|GO:0009873
Phac3g03486 248 FunFam Ethylene-responsive transcription factor 2 134 194 - -
Phac3g03486 248 Pfam AP2 domain 135 185 IPR001471 GO:0003700|GO:0006355
Phac3g03486 248 CDD AP2 134 193 IPR001471 GO:0003700|GO:0006355
Phac3g03486 248 ProSiteProfiles AP2/ERF domain profile. 135 193 IPR001471 GO:0003700|GO:0006355
Phac3g03486 248 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Phac3g03486 248 PRINTS Ethylene responsive element binding protein signature 159 175 IPR001471 GO:0003700|GO:0006355
Phac3g03486 248 SUPERFAMILY DNA-binding domain 135 195 IPR016177 GO:0003677
Phac3g03486 248 SMART rav1_2 135 199 IPR001471 GO:0003700|GO:0006355
Phac3g03486 248 Gene3D AP2/ERF domain 134 196 IPR036955 GO:0003700|GO:0006355
Phac3g03486 248 MobiDBLite consensus disorder prediction 198 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03486 Phac-Chr3 35238797 35240342 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03486 9 247 AP2-EREBP Transcription Factor Family AT4G17500 57.565 1.59e-83 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac3g03486 AP2 9.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03486 K09286 - gmx:100803653 370.548