Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03485 ATGGCCAACGCAGCTGAACTTTCAGCTTTGAATCGCATCAAGTTGCATCTTTTAGGTGAACTGTCACCACTCCACACTCCCCAAAACAAACAACCTTCCTTCCAATTTCATCAAACAAACCCTAGCCCTTCTCAATCTTCTTCCTCTGACTCTTCCCTATCCTTCAATAACTATCTTACTGAACTCCTCGAACCTGAAATTCAATTACCCCTTTTCGAATTCGACTCCAAACCCCAAATAATCGACCTCGACACCCCGAAGCCCCTTCAGAAGAAACCTCAAGTCAGTCGGAAACCGTCGCTGCAAATCTCTCTCCCCAAGAAAACCGAGTGGATCCAATTTGGGAACCCAGATCCGAACCCGGAGGTGGTCTTGCCGGAGAACCAACCGGAGAAGAAGCACTATAGAGGAGTTCGGCAACGGCCTTGGGGGAAGTTCGCAGCCGAGATCCGCGATCCGAACAAGCGCGGGTCAAGAGTGTGGCTCGGAACCTTCGACACCGCCATCGAAGCCGCCAAGGCCTACGACCGCGCTGCCTTCAGGCTCCGCGGCTCCAAAGCCATCCTCAACTTCCCGCTCGAAGTAGGCACGGTGGAGGAGACCGCCGACGCTGAAAGCGAGAGGAAGCGGCGGCGCGAGGAGGAGGAGGTGGAGGAAGTGAAGGTAGTGGTGAAGAAGGAGAAAACGATGGAACAGGAGGTGAACAGTTTTAGGGAGATGCCGTTAACGCCGTCTATGTGGACCGGGTTCTGGGATAGTGATGTGAAGGAGATTTTTAACGTTCCGCCGTTGTCGCCGTTATCTCCTCTTTCGGCTTTTGGATTTTCACCACTCATGGTTGTGTGA 846 0.5284 MANAAELSALNRIKLHLLGELSPLHTPQNKQPSFQFHQTNPSPSQSSSSDSSLSFNNYLTELLEPEIQLPLFEFDSKPQIIDLDTPKPLQKKPQVSRKPSLQISLPKKTEWIQFGNPDPNPEVVLPENQPEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEVGTVEETADAESERKRRREEEEVEEVKVVVKKEKTMEQEVNSFREMPLTPSMWTGFWDSDVKEIFNVPPLSPLSPLSAFGFSPLMVV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03485 281 Pfam AP2 domain 134 184 IPR001471 GO:0003700|GO:0006355
Phac3g03485 281 FunFam Ethylene-responsive transcription factor 2 133 194 - -
Phac3g03485 281 Gene3D AP2/ERF domain 133 194 IPR036955 GO:0003700|GO:0006355
Phac3g03485 281 ProSiteProfiles AP2/ERF domain profile. 134 192 IPR001471 GO:0003700|GO:0006355
Phac3g03485 281 PRINTS Ethylene responsive element binding protein signature 135 146 IPR001471 GO:0003700|GO:0006355
Phac3g03485 281 PRINTS Ethylene responsive element binding protein signature 174 194 IPR001471 GO:0003700|GO:0006355
Phac3g03485 281 MobiDBLite consensus disorder prediction 24 52 - -
Phac3g03485 281 PANTHER DNA-BINDING DOMAIN 60 224 IPR044808 GO:0003700|GO:0009873
Phac3g03485 281 CDD AP2 133 192 IPR001471 GO:0003700|GO:0006355
Phac3g03485 281 SMART rav1_2 134 198 IPR001471 GO:0003700|GO:0006355
Phac3g03485 281 SUPERFAMILY DNA-binding domain 134 194 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03485 Phac-Chr3 35219375 35220769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03485 1 281 AP2-EREBP Transcription Factor Family AT5G47230 48.845 8.21e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Phac3g03485 AP2 5.9e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03485 K09286 - gmx:100800453 372.089