Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03471 ATGGACATGGAAGAATCAAACCCCATGGAAAGAGAAGTTCAACCTACCACCTCATCATCCTCTTTCTCCATTACTCCCTCCACCTCCACCTCCTCCTCCTCCTCCTCTTCCATAGACCAACAACCCACAAACACTAAGGACAAAAAAAACAAGAGAACCAACATTAACACCAATCATGGGAACCACCCCACGTATAGAGGAGTGCGCATGCGCCAATGGGGCAAATGGGTATCCGAAATCAGAGAGCCAAGGAAGAAGTCAAGAATTTGGCTTGGAACTTTTCCCACGCCGGATATGGCGGCTCGAGCGCACGACGTGGCGGCTCTCACCATCAAAGGCAGCTCGGCCTTCCTCAATTTCCCCGAATTAGCTGCCGAGCTGCCCCGCCCCGCCACCAACTCCCCCAAGGATATCCAAGTGGCTGCCGCCAAAGCCGCCGCCTTGGATTTCAACCACCGGAGCCATGAAGCTGAGTCCGAGCTGAGCCGCGGCGGCTCCATTTCCAATTCATCATCGAATTCGTCGTTGAAGGGTGAGGATGACACATTCATGGACCTTCCCGATCTCTCTCCGGATTTGAGCCATGGAGCTGATGAGTTTCATTATTCCTCAGCTTGGCTTGTAACCGGACCGGAACTGGGTTTTCGGCTTGAGGAGCCTTTTCTTTGGGAATCATATTAA 681 0.5257 MDMEESNPMEREVQPTTSSSSFSITPSTSTSSSSSSSIDQQPTNTKDKKNKRTNINTNHGNHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAFLNFPELAAELPRPATNSPKDIQVAAAKAAALDFNHRSHEAESELSRGGSISNSSSNSSLKGEDDTFMDLPDLSPDLSHGADEFHYSSAWLVTGPELGFRLEEPFLWESY* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03471 226 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Phac3g03471 226 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Phac3g03471 226 MobiDBLite consensus disorder prediction 161 179 - -
Phac3g03471 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 41 192 - -
Phac3g03471 226 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Phac3g03471 226 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Phac3g03471 226 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Phac3g03471 226 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Phac3g03471 226 FunFam Ethylene-responsive transcription factor 2 63 122 - -
Phac3g03471 226 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Phac3g03471 226 MobiDBLite consensus disorder prediction 10 43 - -
Phac3g03471 226 MobiDBLite consensus disorder prediction 153 188 - -
Phac3g03471 226 MobiDBLite consensus disorder prediction 1 67 - -
Phac3g03471 226 SUPERFAMILY DNA-binding domain 64 122 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03471 Phac-Chr3 34987579 34988959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03471 57 222 AP2-EREBP Transcription Factor Family AT2G44940 50.495 5.17e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phac3g03471 AP2 8.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03471 - - vum:124847320 337.806