Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03469 ATGGCACCAAGGATCAGTGATGGAACATCCAAGAGATCACCAATGAACAGAGGTGCATGGACCCCAGAGGAAGACCGAAAGCTTGCCCACTGCATTGAAATTCATGGTGCAAAGAGGTGGAAGACTGTAGCACTTAAATCAGGTTTGAATAGATGTGGGAAGAGTTGCAGGCTGAGATGGTTAAACTATCTGAGACCTAATATCAAGAGGGGAAACATATCAGATGAAGAAGAAGATTTGATTCTTAGGCTTCACAGACTCTTGGGAAACAGGTGGTCTTTGATAGCTGGTAGGCTTCCAGGACGAACAGACAATGAAATTAAAAATTATTGGAACTCTCATTTGTGCAAAAAAGTGAATCAGAAAGAGGAGAGACCAGAATCTTCAACAACACAGGAAATTATTGCCCAGAATCAGAATGCTGAGGACAACCATGCAATGTCAGAGAATGGGATTGCAACTAACGAAAGTGGTAACTTAGATGTTACATTCGACGTTGACGAATTTTTCAACTTCTCTGAGGAATCCTGTGGGTTAGATTGGCTGAACAAGTACTTGGGAACTTGA 567 0.4198 MAPRISDGTSKRSPMNRGAWTPEEDRKLAHCIEIHGAKRWKTVALKSGLNRCGKSCRLRWLNYLRPNIKRGNISDEEEDLILRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVNQKEERPESSTTQEIIAQNQNAEDNHAMSENGIATNESGNLDVTFDVDEFFNFSEESCGLDWLNKYLGT* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03469 188 CDD SANT 74 115 IPR001005 -
Phac3g03469 188 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
Phac3g03469 188 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 11 145 - -
Phac3g03469 188 FunFam transcription repressor MYB5-like 74 143 - -
Phac3g03469 188 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Phac3g03469 188 SMART sant 16 66 IPR001005 -
Phac3g03469 188 SMART sant 69 117 IPR001005 -
Phac3g03469 188 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Phac3g03469 188 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Phac3g03469 188 CDD SANT 19 64 IPR001005 -
Phac3g03469 188 MobiDBLite consensus disorder prediction 1 21 - -
Phac3g03469 188 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Phac3g03469 188 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Phac3g03469 188 Gene3D - 17 69 - -
Phac3g03469 188 Gene3D - 73 147 - -
Phac3g03469 188 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Phac3g03469 188 FunFam MYB-related transcription factor 16 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03469 Phac-Chr3 34933108 34934811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03469 15 128 MYB Transcription Factor Family AT3G13540 64.912 3.04e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g03469 Myb_DNA-binding 4.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03469 K09422 - gmx:100799575 332.028