Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03420 ATGGCTCCACTCTTCATCTTGCAAATGTTTCTGCTTTTCAGTTGTTGCATATTATTTCATGCAACAACTGTAACATGCACAAACCACCCCAAAATGGTGTCTTCCACAAACTCATCCAAATGGGTCGGACCCACCGGACACCGAGTAATCACCGTCGACATTAACGGCGGAGGCCATTTCCGATCAGTCCAAGCCGCCGTTAATGCTGTCCCGGACAACAACAGAATGAACGTCCTTATTCAGATAAGCCCCGGATATTACATAGAGAAGGTGGTAGTGCCCGTGACGAAGCCGTACATTACATTTGAAGGAGCGGGGAGAGATGTGACGGTGATAGAATGGCATGATAGGGCCAGTGACCCTGGTCCCAACGGCCAACAACTGCGTACTTACAGAACAGCTTCTGTTACAGTTTTTGCCAACTATTTCTCTGCTAGGAATATCAGCTTCAGGAACACTTCTCCGGCGCCGATGCCGGGAATGGAGGGGTGGCAAGCTGCGGCGTTTCGCATTTCAGGGGACAAAGCCTATTTCTCCGGCTGCGGCTTCTACGGTGCACAAGACACTCTTTGCGACGATGCTGGCCGTCATTACTTCAAAGAATGTTACATTGAGGGTTCCATAGATTTCATTTTTGGGAATGGCAGGTCCATGTACAAGGATTGCAGGCTACACTCAATTGCTACAAGGTTTGGGTCAATAGCAGCCCAAGATAGGAAATCCCCATACGAGAAAACAGGCTTCGCATTCGTACGGTGCAAGGTGACAGGAACAGGCCCGATTTATGTGGGCCGTGCAATGGGCGAGTACTCTAGGATTGTCTATGCCTACACCTACTTCGACAACATAGTTGCACATGGTGGTTGGGATGATTGGAACACTTCTTACAATAACAAGACTGTGTTCTTTGGAGTGTACAAATGCTGGGGACCAGGTGCTGCTGCTATACGTGGAGTCCCATTAGCCCAAGAGCTAGATTTTGAATCTGCTCATCCATTCCTGGTCAAGAGTTTTGTTAATGGGAGACACTGGATGGCACCCTCTGATGCTTAG 1053 0.4872 MAPLFILQMFLLFSCCILFHATTVTCTNHPKMVSSTNSSKWVGPTGHRVITVDINGGGHFRSVQAAVNAVPDNNRMNVLIQISPGYYIEKVVVPVTKPYITFEGAGRDVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANYFSARNISFRNTSPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCRLHSIATRFGSIAAQDRKSPYEKTGFAFVRCKVTGTGPIYVGRAMGEYSRIVYAYTYFDNIVAHGGWDDWNTSYNNKTVFFGVYKCWGPGAAAIRGVPLAQELDFESAHPFLVKSFVNGRHWMAPSDA* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03420 350 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 345 - -
Phac3g03420 350 SUPERFAMILY Pectin lyase-like 47 347 IPR011050 -
Phac3g03420 350 ProSitePatterns Pectinesterase signature 2. 204 213 IPR033131 -
Phac3g03420 350 Gene3D - 45 349 IPR012334 -
Phac3g03420 350 FunFam Pectinesterase 45 347 - -
Phac3g03420 350 Pfam Pectinesterase 50 341 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03420 Phac-Chr3 34666835 34671115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03420 7 350 Carbohydrate Esterase AT5G47500 72.334 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03420 - - gmx:100796327 661.759