Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03370 ATGGATTTGAAGTCCTCTCATGTTTCTCCTGTTCTCACTGACCCTGTTCCCGTCAACAAGTCAAGGCTTCGAATGCATTCTAGTCTGCTAGCTTATTCCCAGCAAGATTCACCTGTCTCTCCAGGGAAGTGCTCAAGAAGCAATTCAAGGAAAAGTACGGGGAGTGTCGATGATGTGAGGTCCAATGGTTGGTTGGATGCCATGAAGGCTTCTTCCCCTCCAAGGAAGAAGCTACTTAAAGGGTCCAGTGTTCAGGTTGCTTCAATTGACTTTGAGATTGAAGACTATTGTACATGGATGCTTGAATATCCTTCAGCACTAGACTCTTTTGAGAACATCCTTGACCTTGCTCAGAATAAGAAGATTGCCATGTTTCTAGATTATGACGGCACACTTTCACCGATAGTAGATGATCCGGATTGTGCCTTTATGTCCGAATCTATGCGTACAACTGTGAGAAGTGTGGCAACGTATTTCCCCACAGCAATCATCAGTGGAAGAAGCCGTGACAAGGTTTTTGATCTTGTTAAACTAACAGAGCTCTACTACGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTTAGTGAGACTTTGTCCAAAAATCACCCAAATTGTGTAAAGTCTACAGACCATGAGGGAAAGGAAATAACTCTCTTTCAACCAGCGAGAGAATTCCTGCCTATGGTTGATGAGGTTTTTAGAACCCTCGTCGAGATTACTAAAGATATAGAAGGCGCAAAAGTTGAAAACCACAAATTTTGCGTTTCTGTACATTACCGTAATGTAGAGGAGAATAATTGGACAACAATTGGACAACGTGTCCATGATGTCTTGCAAAGTTACCCTCGTTTACGTTCAACTCATGGACGGAAGGTTTTAGAAGTCCGTCCTGTGGTTGATTGGAATAAAGGAAAAGCTGTTGAGTTTTTACTTGAATCTCTAGGATTAAATGATAGTGATGATGTGCTTCCCATCTACATTGGAGATGATAAAACTGATGAAGATGCATTCAAGGTGCTGCGAGAGAGCAGTAGAGGTTATGGGATTTTGGTTTCGTCGGTGAGGAAAGAAAGCAATGCCTTCTACTCTCTCCGAGACCCCAGTGAGGTCATGAAATTTCTCCAACTCTTGGTGAACTGGAAGAGACAAGAAAGATAG 1161 0.4281 MDLKSSHVSPVLTDPVPVNKSRLRMHSSLLAYSQQDSPVSPGKCSRSNSRKSTGSVDDVRSNGWLDAMKASSPPRKKLLKGSSVQVASIDFEIEDYCTWMLEYPSALDSFENILDLAQNKKIAMFLDYDGTLSPIVDDPDCAFMSESMRTTVRSVATYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVSETLSKNHPNCVKSTDHEGKEITLFQPAREFLPMVDEVFRTLVEITKDIEGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDVLQSYPRLRSTHGRKVLEVRPVVDWNKGKAVEFLLESLGLNDSDDVLPIYIGDDKTDEDAFKVLRESSRGYGILVSSVRKESNAFYSLRDPSEVMKFLQLLVNWKRQER* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03370 386 FunFam Trehalose 6-phosphate phosphatase 229 386 - -
Phac3g03370 386 FunFam Trehalose 6-phosphate phosphatase 223 299 - -
Phac3g03370 386 NCBIfam HAD-IIB family hydrolase 124 343 IPR006379 -
Phac3g03370 386 Pfam Trehalose-phosphatase 125 369 IPR003337 GO:0003824|GO:0005992
Phac3g03370 386 Gene3D - 220 386 IPR023214 -
Phac3g03370 386 Gene3D - 122 210 IPR023214 -
Phac3g03370 386 MobiDBLite consensus disorder prediction 34 60 - -
Phac3g03370 386 FunFam Trehalose 6-phosphate phosphatase 122 211 - -
Phac3g03370 386 CDD HAD_TPP 123 373 - -
Phac3g03370 386 NCBIfam trehalose-phosphatase 120 379 IPR003337 GO:0003824|GO:0005992
Phac3g03370 386 SUPERFAMILY HAD-like 123 383 IPR036412 -
Phac3g03370 386 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 32 385 IPR044651 GO:0004805|GO:0005992
Phac3g03370 386 MobiDBLite consensus disorder prediction 34 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03370 Phac-Chr3 34365266 34372193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03370 109 375 Trehalose Biosynthesis Gene Families AT1G23870 26.241 5.90e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03370 K01087 - tcc:18606311 572.007