Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03365 ATGGATTTGAAGTCCTCTCATGTTTCTCCTGTTCTCACTGACCCTGTTCCCGTCAACAAGTCAAGGCTTCGAATGCATTCTAGTCTGCTAGCTTATTCCCAGCAAGATTCACCTGTCTCTCCAGGGAAGTGCTCAAGAAGCAATTCAAGGAAAAGTACGGGGAGTGTCGATGATGTGAGGTCCAATGGTTGGTTGGATGCCATGAAGGCTTCTTCCCCTCCAAGGAAGAAGCTACTTAAAGGGTCCAGTGTTCAGGTTGCTTCAATTGACTTTGAGATTGAAGACTATTGTACATGGATGCTTGAATATCCTTCAGCACTAGACTCTTTTGAGAACATCCTTGACCTTGCTCAGAATAAGAAGATTGCCATGTTTCTAGATTATGACGGCACACTTTCACCGATAGTAGATGATCCGGATTGTGCCTTTATGTCCGAATCTATGCGTACAACTGTGAGAAGTGTGGCAACGTATTTCCCCACAGCAATCATCAGTGGAAGAAGCCGTGACAAGGTTTTTGATCTTGTTAAACTAACAGAGCTCTACTACGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTTAGTGAGACTTTGTCCAAAAATCACCCAAATTGTGTAAAGTCTACAGACCATGAGGGAAAGGAAATAACTCTCTTTCAACCAGCGAGAGAATTCCTGCCTATGGTTGATGAGGTTTTTAGAACCCTCGTCGAGATTACTAAAGATATAGAAGGCGCAAAAGTTGAAAACCACAAATTTTGCGTTTCTGTACATTACCGTAATGTAGAGGAGAATAATTGGACAACAATTGGACAACGTGTCCATGATGTCTTGCAAAGTTACCCTCGTTTACGTTCAACTCATGGACGGAAGGTTTTAGAAGTCCGTCCTGTGGTTGATTGGAATAAAGGAAAAGCTGTTGAGTTTTTACTTGAATCTCTAGGATTAAATGATAGTGATGATGTGCTTCCCATCTACATTGGAGATGATAAAACTGATGAAGATGCATTCAAGGTATTGAATTTAAGCATTTTCCGTGCTTTCTTTGATAAGACAGATTATTATGCTAGGAATTTTAATGATTGCAAGGTGCATGTGCTAAATATATAG 1113 0.4115 MDLKSSHVSPVLTDPVPVNKSRLRMHSSLLAYSQQDSPVSPGKCSRSNSRKSTGSVDDVRSNGWLDAMKASSPPRKKLLKGSSVQVASIDFEIEDYCTWMLEYPSALDSFENILDLAQNKKIAMFLDYDGTLSPIVDDPDCAFMSESMRTTVRSVATYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVSETLSKNHPNCVKSTDHEGKEITLFQPAREFLPMVDEVFRTLVEITKDIEGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDVLQSYPRLRSTHGRKVLEVRPVVDWNKGKAVEFLLESLGLNDSDDVLPIYIGDDKTDEDAFKVLNLSIFRAFFDKTDYYARNFNDCKVHVLNI* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03365 370 CDD HAD_TPP 123 342 - -
Phac3g03365 370 SUPERFAMILY HAD-like 123 345 IPR036412 -
Phac3g03365 370 FunFam Trehalose 6-phosphate phosphatase 223 299 - -
Phac3g03365 370 Gene3D - 205 299 - -
Phac3g03365 370 Pfam Trehalose-phosphatase 125 342 IPR003337 GO:0003824|GO:0005992
Phac3g03365 370 MobiDBLite consensus disorder prediction 34 60 - -
Phac3g03365 370 FunFam Trehalose 6-phosphate phosphatase RA3 122 262 - -
Phac3g03365 370 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 32 342 IPR044651 GO:0004805|GO:0005992
Phac3g03365 370 Gene3D - 124 342 IPR023214 -
Phac3g03365 370 MobiDBLite consensus disorder prediction 34 59 - -
Phac3g03365 370 NCBIfam trehalose-phosphatase 120 342 IPR003337 GO:0003824|GO:0005992
Phac3g03365 370 NCBIfam HAD-IIB family hydrolase 124 345 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03365 Phac-Chr3 34365266 34372193 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03365 109 339 Trehalose Biosynthesis Gene Families AT1G23870 25.523 2.18e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03365 K01087 - tcc:18606311 511.916