Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03359 ATGTTTCAGGTAAGCGTTCCCTGCACAAGCTTGTTCAAGACAGTTACTGTCCGATGCGGTCATTGCACTAACCTCCTGCCAGTGAACATGCGCGGCCTGCTTGTGCCATCTCCCACTCAATTTCATTTGGGTCACTCTTTCTTCTCCCCGTCCCATAACCTTCTGGAGGAGATACCAAACCCCTCTCCAAATTTTCTTATGAACCAAACAAATTTAAGTGCTTCCAATGAGTTCTCTATGCCTGCTAGGGCCGCAGCTGATGAGCTTCCACGGCCACCGATCATAAACAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCAGCGTACAACCGCTTTATCAAGGACGAGATCCAACGCATCAAGTCTGTCAATCCCGATATAACTCACAGGGAAGCCTTCAGTGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGAAGGAGAAGAGGTTCTCATGAAAGATGGGTTTTATGCTTCAGCTAATGTTGGTGTCTCACCCTACTAA 561 0.4884 MFQVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLVPSPTQFHLGHSFFSPSHNLLEEIPNPSPNFLMNQTNLSASNEFSMPARAAADELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVCQQEGEEVLMKDGFYASANVGVSPY* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03359 186 CDD HMG-box_SF 104 140 - -
Phac3g03359 186 FunFam Axial regulator YABBY 95 166 - -
Phac3g03359 186 Gene3D High mobility group box domain 95 159 IPR036910 -
Phac3g03359 186 Pfam YABBY protein 2 150 IPR006780 GO:0007275
Phac3g03359 186 SUPERFAMILY HMG-box 94 143 IPR036910 -
Phac3g03359 186 PANTHER PROTEIN YABBY 6-RELATED 2 160 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03359 Phac-Chr3 34292663 34295818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03359 2 184 C2C2-YABBY Transcription Factor Family AT4G00180 60.294 6.44e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac3g03359 YABBY 1.6e-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03359 K25796 - gmx:100798441 371.703