Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03358 ATGTTCACTGCAATATTTGTGACACCGTCCTCGCTGTATGAACACATTTTTCTTTCCCACTTTTCCAACTCTAGGGTAAGCGTTCCCTGCACAAGCTTGTTCAAGACAGTTACTGTCCGATGCGGTCATTGCACTAACCTCCTGCCAGTGAACATGCGCGGCCTGCTTGTGCCATCTCCCACTCAATTTCATTTGGGTCACTCTTTCTTCTCCCCGTCCCATAACCTTCTGGAGGAGATACCAAACCCCTCTCCAAATTTTCTTATGAACCAAACAAATTTAAGTGCTTCCAATGAGTTCTCTATGCCTGCTAGGGCCGCAGCTGATGAGCTTCCACGGCCACCGATCATAAACAGACCTCCTGAGAAGAGACAGAGAGTCCCCTCAGCGTACAACCGCTTTATCAAGGACGAGATCCAACGCATCAAGTCTGTCAATCCCGATATAACTCACAGGGAAGCCTTCAGTGCAGCTGCCAAGAATTGGGCCCACTTCCCACACATCCACTTTGGTCTCATGCCTGATCAGACTGTGAAGAAGACAAATGTGTGCCAGCAGGAAGGAGAAGAGGTTCTCATGAAAGATGGGTTTTATGCTTCAGCTAATGTTGGTGTCTCACCCTACTAA 627 0.4817 MFTAIFVTPSSLYEHIFLSHFSNSRVSVPCTSLFKTVTVRCGHCTNLLPVNMRGLLVPSPTQFHLGHSFFSPSHNLLEEIPNPSPNFLMNQTNLSASNEFSMPARAAADELPRPPIINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDITHREAFSAAAKNWAHFPHIHFGLMPDQTVKKTNVCQQEGEEVLMKDGFYASANVGVSPY* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03358 208 Pfam YABBY protein 26 172 IPR006780 GO:0007275
Phac3g03358 208 CDD HMG-box_SF 126 162 - -
Phac3g03358 208 FunFam Axial regulator YABBY 117 188 - -
Phac3g03358 208 SUPERFAMILY HMG-box 116 165 IPR036910 -
Phac3g03358 208 PANTHER PROTEIN YABBY 6-RELATED 26 182 IPR006780 GO:0007275
Phac3g03358 208 Gene3D High mobility group box domain 117 180 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03358 Phac-Chr3 34292663 34295818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03358 23 206 C2C2-YABBY Transcription Factor Family AT4G00180 60.000 6.20e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Phac3g03358 YABBY 5e-57 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03358 K25796 - gmx:100798441 371.703