Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03341 ATGGGTTCTCAACAGAACAACGGCACCAGCTACCCCCCTTCGGAGCCCAAGCCCTGCGCCAACAACTGCGGTTTCTTCGGCACTCCCGATAACCAAAACCTCTGTTCCAAATGCTACAAGCAACACCAGAACCAGCTTTCTGCAATAAACTCCCTCTTCTGTCCCTCCGCCGCGCCGCCACCGCTTCTTGACGCGGCAGAGCCATCCTCTTTGGCGGCGCCTTCGCCGTGCGCGGCCGAGCCTTCCAAACCGACCAATCGGTGCGGGGATTGCAACAGAAAAGTGGGTTTAACCGGTTTCTTGTGCAAGTGTGGGACCACCTTCTGCGGGGTGCACCGTTACCCGGAGAAGCACCAGTGCACCTATGACTTCAAGAGTGCTGGGCGTGAAGAGATTGCCAAGGAAAATCCTGTTGTAAAGGCTGACAAGATTCAAAGGTTTTAG 444 0.5586 MGSQQNNGTSYPPSEPKPCANNCGFFGTPDNQNLCSKCYKQHQNQLSAINSLFCPSAAPPPLLDAAEPSSLAAPSPCAAEPSKPTNRCGDCNRKVGLTGFLCKCGTTFCGVHRYPEKHQCTYDFKSAGREEIAKENPVVKADKIQRF* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03341 147 SMART AN1_Zf_4 88 125 IPR000058 GO:0008270
Phac3g03341 147 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 146 - -
Phac3g03341 147 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Phac3g03341 147 Pfam AN1-like Zinc finger 88 124 IPR000058 GO:0008270
Phac3g03341 147 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 45 - -
Phac3g03341 147 SUPERFAMILY AN1-like Zinc finger 79 142 IPR035896 -
Phac3g03341 147 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Phac3g03341 147 Gene3D - 76 133 IPR035896 -
Phac3g03341 147 MobiDBLite consensus disorder prediction 65 85 - -
Phac3g03341 147 FunFam Zinc finger AN1-type containing 6 65 143 - -
Phac3g03341 147 ProSiteProfiles Zinc finger AN1-type profile. 82 128 IPR000058 GO:0008270
Phac3g03341 147 Gene3D - 1 75 - -
Phac3g03341 147 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03341 Phac-Chr3 34148424 34149144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03341 13 147 C2H2 Transcription Factor Family AT3G52800 38.509 6.25e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03341 - - vun:114175511 215.698