Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03336 ATGGATCCAATCACAGCACATGGTCATTCCCTTCCCCCTCCTTTTCACACCAGAGATCTCCATCTGCACCACCAGCCGCAACAGCACCAATTCCAAACCTTAAACCAAGGCACCGACGACGAGCACAGCGGAAGCAGCAGCGCGCAGAAGAGGGAGCGCGAAGAGAACAACGGCAACAACAACGATGAAGGTGCAGGTGAGGCTGAGATAACAAGGAGACCTCGCGGGAGACCAGCCGGCTCCAAAAACAAACCCAAGCCACCCATTATCATCACTCGCGACAGCGCAAACGCCATGAGAACCCACATGATGGAGGTGGCAGACGGGTGCGACATCGTGGAAAGCGTGTCTGAGTTCGCCAGGAAACGCCAAAGAGGGGTTTGCATCATGAGTGGCACTGGCACAGTCACCAACGTCACTCTCAGGCAACCGGCTTCTTCCGGTGCGGTTGTCACTCTCCATGGAAGGTTCGAGATTTTGTCCCTCAGTGGATCGTTCCTTCCGCCGCCTGCGCCACCTGCTGCTTCCGGTTTGACCATTTATTTGGCCGGTGGCCAGGGACAGGTGGTGGGAGGGAGTGTGGTTGGGACACTGGTTGCTTCGGGGCCTGTGGTGATCATGTCTGCTTCGTTCAGCAACGCTGCTTATGAGAGGCTTCCTTTGGAGGATGAAGACCCTTCGCTGCAAATGCAAGGAGGTTCAATTGGGTCACCCGGTGCAAGTGGTGTTGGTCAGTCACAGCTTCTAGGAGGAGGAGATGCAGCTGCTCCACTTTTCCATGGTTTGCCTCCTAACCTTCTCAATTCTGTTCAAATGCCTTCTGAGCCATTCTGGGCATCCAATCGCCCTCCCTTCTAG 858 0.5548 MDPITAHGHSLPPPFHTRDLHLHHQPQQHQFQTLNQGTDDEHSGSSSAQKREREENNGNNNDEGAGEAEITRRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVADGCDIVESVSEFARKRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLVASGPVVIMSASFSNAAYERLPLEDEDPSLQMQGGSIGSPGASGVGQSQLLGGGDAAAPLFHGLPPNLLNSVQMPSEPFWASNRPPF* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03336 285 Gene3D - 99 231 - -
Phac3g03336 285 MobiDBLite consensus disorder prediction 26 43 - -
Phac3g03336 285 MobiDBLite consensus disorder prediction 1 91 - -
Phac3g03336 285 CDD DUF296 100 167 IPR005175 -
Phac3g03336 285 MobiDBLite consensus disorder prediction 44 76 - -
Phac3g03336 285 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Phac3g03336 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Phac3g03336 285 PIRSF ESCAROLA 15 285 IPR014476 GO:0003680
Phac3g03336 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 279 IPR014476 GO:0003680
Phac3g03336 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 228 - -
Phac3g03336 285 FunFam AT-hook motif nuclear-localized protein 99 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03336 Phac-Chr3 34128795 34130879 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03336 1 285 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 54.154 1.57e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03336 - - gmx:100807581 460.299