Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03333 ATGGAGTCAAGTGGCGGTGTTAGCGGGGGCGTTACGGTGGTGGGATCGGATGCTCCGTCAGACTACCATGTAGCTCCGAGGACCGACAACCCAGCTCCCGCAAGCGGATCCACGACGCAAATTCCGGCGACGACGGGGAGTGCTCCACCGTCACATCCACCGCATACGGCGGCGATGGAGGCGTCGCCTGCGACGATGCCGGCTAAAAAGAAGAGGGGCCGGCCGAGAAAGTACGCACCGGACGGCTCGGTGACCATGGCGCTGTCTCCGAAGCCGATATCTTCCTCCGCTCCGTTGCCGCCGGTGATCGATTTCTCGTCGGAGAATCGCGGAAAAATAAAACCAACTAGTTCCGTGAGCAAAACCAAATTTGAGTTGGAGAATATAGGTGAATGGGTTGCATGCTCAGTTGGTGCTAATTTCACTCCCCATATCATCACTGTTAATTCTGGAGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGGCCTCGAGCAATATGCATTCTTTCAGCTAATGGTGTCATATCAAGTGTCACACTTCGTCAACCCGATTCTTCGGGGGGTACATTGACATATGAGGGACGGTTTGAAATTCTATCTTTATCTGGCTCATTCATGCCCAATGAAAGTGGAGGAACCCGGAGCAGATCCGGTGGCATGAGTGTATCTTTGGCAAGCCCCGATGGACGTGTTGTAGGTGGGGGAGTAGCTGGTTTATTGGTGGCTGCAAGTCCTGTGCAGGTAGTGGTAGGAAGTTTTCTGGCAGGAAACCAACATGAGCAGAAGCCAAGAAAACATAAACATGAAGTTATAACAAGTGTGACACCAGCAGCAGTTGTTCCCATCTCCACTCTTGATCCAATACCAATTCTCTCATCTGCAACTTCCATCCGCGGAGAAAGTTGGTCTGCTATGCCAGCAGAGGCCAAGAATAAACCAGCTGACATTAACGTGACGCTTCCAGCAGGGTAA 981 0.5148 MESSGGVSGGVTVVGSDAPSDYHVAPRTDNPAPASGSTTQIPATTGSAPPSHPPHTAAMEASPATMPAKKKRGRPRKYAPDGSVTMALSPKPISSSAPLPPVIDFSSENRGKIKPTSSVSKTKFELENIGEWVACSVGANFTPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQKPRKHKHEVITSVTPAAVVPISTLDPIPILSSATSIRGESWSAMPAEAKNKPADINVTLPAG* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03333 326 CDD DUF296 142 233 IPR005175 -
Phac3g03333 326 MobiDBLite consensus disorder prediction 31 46 - -
Phac3g03333 326 Gene3D - 143 275 - -
Phac3g03333 326 ProSiteProfiles PPC domain profile profile. 138 277 IPR005175 -
Phac3g03333 326 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 284 IPR039605 GO:0003680
Phac3g03333 326 SUPERFAMILY AF0104/ALDC/Ptd012-like 140 259 - -
Phac3g03333 326 FunFam AT-hook motif nuclear-localized protein 1-like 143 274 - -
Phac3g03333 326 Pfam Plants and Prokaryotes Conserved (PCC) domain 143 256 IPR005175 -
Phac3g03333 326 MobiDBLite consensus disorder prediction 1 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03333 Phac-Chr3 34075185 34080994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03333 1 323 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 61.582 6.94e-130 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03333 - - gmx:100794202 570.852