Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03300 ATGATTTTATCGCACATATATGTAATTAATAACTTGGGCAAGAAAGGAAGAGGGCTTTATATAAAGGTGGGTGGGGAGTGGGGCTTTTGGGTCATTACTCATTACAAGCTTGTGTTGCTTGGTAGTGCTGTTGTTTGTGTTAGTGGTATGGGGAGGCAACCCTGCTGTGACAAACTTGGGGTGAAGAAAGGTCCATGGACTGCAGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACCAATGGTCAGTGTTGTTGGCGTGCTGTGCCAAAGCTTGCTGGCCTTAGGCGTTGTGGCAAGAGTTGTCGCCTTCGTTGGACTAATTATCTTCGCCCAGACTTGAAGAGAGGACTCCTAACAGAAGCAGAGGAGCAACTTGTTATTGATCTCCATGCCCGTCTTGGCAACAGGTGGTCCAAAATTGCTGCCAGGTTGCCCGGAAGAACAGACAACGAGATTAAAAATCATTGGAACACACATATCAAGAAAAAACTCCTTAAGATGGGTATTGATCCCGTTACTCACGAACCTCTCAATAAACAAGCAGCATCTCAGGATAGTTCATCCTCCCCTTCAGAGCATTTGCCACAACCTGGAAATAACCTTGATCAGGTGAAGGAAACTGATGGGGTTCTCAACTCAGAGGAGAATTCAAGTTCATCCCAAGCTGAAAATTCTTCTGGGGATGATTCACTTTTGCTAGAGAGCATTTGCAGTGACGATTCTCTATTAAACACCCTGTGGCTGGATGAAACTCCTCTGATGGAAGCACTATGGGACACAACACCCAAACTAGAGAATACTAGTAGTAACATGGGTTCCGTACCATCTTGGGAGGACAATTGTGGTTGGTTATTGGACTGTCAGGACTTCGGTATTCATGATTTTGGGTTTAACTGTTTCAACGAGATAGAGTCAAAGGCTCTGCAAGCTCTAGAAATGAAGGACGAGGGGCATTAA 960 0.449 MILSHIYVINNLGKKGRGLYIKVGGEWGFWVITHYKLVLLGSAVVCVSGMGRQPCCDKLGVKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEQLVIDLHARLGNRWSKIAARLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQAASQDSSSSPSEHLPQPGNNLDQVKETDGVLNSEENSSSSQAENSSGDDSLLLESICSDDSLLNTLWLDETPLMEALWDTTPKLENTSSNMGSVPSWEDNCGWLLDCQDFGIHDFGFNCFNEIESKALQALEMKDEGH* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03300 319 Gene3D - 120 194 - -
Phac3g03300 319 SUPERFAMILY Homeodomain-like 60 157 IPR009057 -
Phac3g03300 319 FunFam MYB transcription factor 119 195 - -
Phac3g03300 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 110 IPR017930 -
Phac3g03300 319 Pfam Myb-like DNA-binding domain 63 110 IPR001005 -
Phac3g03300 319 Pfam Myb-like DNA-binding domain 120 160 IPR001005 -
Phac3g03300 319 FunFam MYB transcription factor 60 116 - -
Phac3g03300 319 Gene3D - 61 116 - -
Phac3g03300 319 CDD SANT 120 161 IPR001005 -
Phac3g03300 319 ProSiteProfiles Myb-like domain profile. 111 161 IPR001005 -
Phac3g03300 319 PANTHER F14D16.11-RELATED 50 220 - -
Phac3g03300 319 ProSiteProfiles Myb-like domain profile. 58 110 IPR001005 -
Phac3g03300 319 MobiDBLite consensus disorder prediction 179 229 - -
Phac3g03300 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 111 165 IPR017930 -
Phac3g03300 319 SMART sant 115 163 IPR001005 -
Phac3g03300 319 SMART sant 62 112 IPR001005 -
Phac3g03300 319 CDD SANT 65 110 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03300 Phac-Chr3 33831904 33834453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03300 50 298 MYB Transcription Factor Family AT4G22680 61.278 9.05e-103 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phac3g03300 Myb_DNA-binding 3.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03300 K09422 - gmx:100786965 493.426