Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03280 ATGGCGTCCAATCAGGAGGAACAGGACATGGATCAAGATCAACACGGAGGAAAAACGGACCTCAGCACCAGCCACGCCGACGCAGACAAACCCTCATCCCAACGCACTAACCTCAATGGACTTCCCCAACACTTCCAAGTCCTGCCGCTCAAAAACGAGCCAACAGATTCCGACCCTGACCCGGACCCAAACGCACCGATTCCTCCGCCGCCGCCGATGCACCTTTCGCTCAAATCGCCCAGGCGCTCATCCACCAAGGACCGTCACACCAAAGTCGAAGGCCGTGGCCGCAGGATCCGAATACCCGCCACCTGCGCCGCCCGGATCTTCCAACTCACCCGAGAGCTGGGCCACAAATCCGACGGCGAAACTGTCCGGTGGCTCCTCGAGCACTCCGAGCCGGCCATCATAGAAGCCACCGGCACAGGCACGGTGCCGGCCATCGCAGTCTCCGTCGGCGGCGCGCTCAAAATCCCCACGACCTCGAGCGCCAACCAAACCAACGAGGGCGAGGAAGGCGCGTCTAACAAGAAACGGAAACGCCCTTCCAACAGCGAGTTCGTGGACGTAAACGATGCCGTTTCGCAGACGTCTGGTCTGGCCCCGGTTCAAGTACCCCAAGGACTGGTCCCGGTCTGGGCCGTAAGTAACCCCAGCATGGTGGTCCCCGCTAACACCTTCTGGATGATCCCGCAGGCCGCGACCACCAGCAACCCCTTGGGCGGAGTTACGGGCCCCGCCAGCCAACGGCCTCAGATATGGGCCTTATCTCCCTCCGTATTCAACGTGGCGGCTAGGCCCATATCGAGTCTCGTGACGACAACGAATATTCCAGAAGCTTGGCCCGTTATGACGGCCTGCAGTAACGGTTCTAACTCAGCAGCGGTGAGTACGAGCACGGTGGGGGCTAAAGTGGCTACTAATTCTAGCATGGCCCCTAGTGTTAGTTCCAGCGCCACCAAGACTCAGACGTTGCGGGATTTTTCCCTCCAAATTTACGATAAGCAAGAGTTGCAGTTCTTGGGCCGCTCTGGCACTCACGCCAATCCATGA 1053 0.5954 MASNQEEQDMDQDQHGGKTDLSTSHADADKPSSQRTNLNGLPQHFQVLPLKNEPTDSDPDPDPNAPIPPPPPMHLSLKSPRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHSEPAIIEATGTGTVPAIAVSVGGALKIPTTSSANQTNEGEEGASNKKRKRPSNSEFVDVNDAVSQTSGLAPVQVPQGLVPVWAVSNPSMVVPANTFWMIPQAATTSNPLGGVTGPASQRPQIWALSPSVFNVAARPISSLVTTTNIPEAWPVMTACSNGSNSAAVSTSTVGAKVATNSSMAPSVSSSATKTQTLRDFSLQIYDKQELQFLGRSGTHANP* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03280 350 MobiDBLite consensus disorder prediction 8 25 - -
Phac3g03280 350 MobiDBLite consensus disorder prediction 80 98 - -
Phac3g03280 350 ProSiteProfiles TCP domain profile. 85 139 IPR017887 -
Phac3g03280 350 Pfam TCP family transcription factor 84 179 IPR017887 -
Phac3g03280 350 MobiDBLite consensus disorder prediction 26 43 - -
Phac3g03280 350 MobiDBLite consensus disorder prediction 159 184 - -
Phac3g03280 350 MobiDBLite consensus disorder prediction 1 98 - -
Phac3g03280 350 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 336 IPR005333 GO:0003700
Phac3g03280 350 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03280 Phac-Chr3 33715548 33717027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03280 36 347 TCP Transcription Factor Family AT2G45680 44.011 4.24e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phac3g03280 TCP 5.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03280 - - gmx:100797827 466.077